KEGG T01011: 100490796

Xenopus tropicalis (tropical clawed frog): 100490796

Entry

100490796         CDS       T01011

Symbol

ift172

Name

(RefSeq) intraflagellar transport protein 172 homolog

K19676

intraflagellar transport protein 172

Organism

xtr Xenopus tropicalis (tropical clawed frog)

Brite

KEGG Orthology (KO) [BR:xtr00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:xtr03037]
    100490796 (ift172)
Cilium and associated proteins [BR:xtr03037]
Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B2
   100490796 (ift172)

SSDB

Motif

Pfam:

Clathrin WD40 ANAPC4_WD40 Coatomer_WDAD

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Xenbase:

UniProt:

Position

5:complement(162157747..162209324)

AA seq 1749 aa
MQLKYLKSLLAPQDGAARVTCMAWAPNNMKFAVCTVDCVVILYDEQGERRDKFSTKPVDA
KYGKKSYVVKGMAFSPDSTKIAIGQTDSIIFVYKIGENWGDKKVICNKFIQTSAVTCLLW
PAEHAIVFGLAEGKVRLANTRTNKSSTIYGTDSCVISLTTNISGQGILSGHADGTIVRYF
LDDEGSGESQGKLVTHPCPPYALAWAANSIVAGGCDMKLVAYGREGQVIQQFDYSRDPTE
KEFTVAASSPSGQSVVVGSYDRLRVLNWSSRRGLWEEGKAKDIPNLYTITAKAWKRDGSK
LCVGTLCGGVELFDCCLRRLNYKNKFEMTYVGPSQVIVKNLSTGTRVVLKSHYGYEVDEV
KILGKERYLVAHTSDTLLLGDLATNRLSEVAWQGSGGNEKFFFDNENVCMIFNAGELTLV
EYGSNEILGTVRTEFMNPHLISVRLNERRQRGAEENKKLAYLIDRKTIAIVDLVAGHNVG
TVAHDIKIDWLELNETGHKLLFRDKHLQLNLYDIESSKKTAILDYCSYVQWVPGSDVVVA
QNRSNLCVWYTIDSPETVTMFPLKGDIVDLERKEGKTEVIVTEGVNTISYTLDEGMIEFG
TAIDDGDYYRAAAFLETLEMSRETEAMWRRLAKLALEGRYLLIADRSYTALGNVARAKFL
RETNRMAEEAAKEYGGDGTDYYQVRARLAVLEENFKLAEMIYLEQNDVLEAMKMYHDLHW
WEEFIAVPGAKEHPEFETLRRSHLQYLTETHQEERAGEVFEQEGDYITALNLYLRAGLPT
KAARLCLAHDRLLSDPELIGRVTSALIKGEFYERAGDLFEKINNPRRALECYCKDNAFQK
AIELARGSFPGEVVKLEESWGDFLVQQKQQDAAINHYIEAGCSMKAIEAALGARQWKKAL
HIVELQAPETARSYYLKIAQHYALLKEYEVAEHLYIKADRTKDAIEMYTQAGHWELAHSL
AVRCMEHEDVSGMYIGQARELEKQGKYKEAERLYITVDEADLAITMYKKHKMYEDMIRLV
QKFHPDLLTDTHLHLGKELETEGSYQEAEYHYLEGSDWKAAVNMYRGADMWEDAHRVAKS
HGAANAHKKVAYLWAKSLGGEAAVKLLSKFSLVEMAIDYAAENCTFDFAFELARLAMKPK
LPEIHLKCAIFLEDEGKFAEAEAEFVKAEKPKEAVLMYVHNQDWDSAQRVAELYDPDSVG
DVLEGQARFAFEQKEYQKAEAFLLRAHRPELAVRYYKEAGMWSDAIRICKEYVPARLEQL
QLEYERDVTKKGARGTEAMLEQAREWEQAGEYTRAVDCYLKVRDTDNLPLMEKCWMKAGE
IAIKFLPPVKRLEVVRTVGPQLVSVSKHSAAAELYLNMDLIKEAIDAFIEGEEWNKAKRV
AKELDPRYEDYVDGQYKEYLKNQGKVESLVGVDVMAALEMYAERGQWEKCIETAAKQNYK
VLHKYAALFASHLITEGNWAKALSLYAQHGAPANPQNFNIYKRIFMEMVNAEGLNQAEGY
HAWAELRDTLYQLCENLVKSSEVNSQAHQDFQQMLLVAHYYSTRSASQGVPPLEVVAAKL
SISLLRHTDVVPADKAFYEAGMAAKGMGWKNSAFIFLNRFLDLVDAIEEGSLDALDHSDF
QDTDIPFEVPLPARQHVPAEKREEVREWVLAVAMDQRVDQVLPQDERGTYEGSLIARSSG
IHSLPCLITGFPVLRNKVEFKQPGSAANKEDWNKFLMAVKTSHSPECQDVLQFIGRWCGG
LPSSTFSFQ

NT seq 5250 nt +upstreamnt +downstreamnt
atgcagctaaagtatctgaagagccttctggccccgcaggatggcgctgccagggtgacg
tgcatggcgtgggcaccgaataacatgaaatttgccgtctgtacagtcgactgcgtcgtc
attttgtacgatgaacagggcgagaggcgggacaagttctccaccaaaccggtcgatgcc
aagtatgggaagaagagttacgtggtgaaaggaatggccttctccccggactccaccaag
attgccattggccagaccgacagcattatatttgtctacaagattggggagaactgggga
gacaagaaagttatttgcaacaaattcatccagacgagtgcggtgacctgcctcctgtgg
ccggcggaacatgccattgtctttggcctggccgaggggaaggtccgtctggccaatacc
agaactaacaaatcctccactatctatgggactgactcctgtgtgatctccctaacaacc
aacatctcgggccaaggaatcctctcgggccatgcagatggcaccattgtcagatatttc
ctagacgatgaaggttctggtgaatcccaggggaaactggtgacccatccctgcccacca
tatgccttagcgtgggcagcaaacagcattgtagccgggggctgcgatatgaagttggtg
gcctacggcagagagggccaagtcatccaacagtttgattacagtcgggatcccacggag
aaagagttcacggtggcggctagtagccccagtggccagtctgttgttgtcggcagctat
gacaggctgcgggtgctgaactggagctccaggagaggattgtgggaggaaggcaaagcc
aaagatattcccaacctgtacacaataacggcaaaagcctggaaacgggacggctccaag
ctctgcgtgggcaccctgtgtggcggagtggaactgttcgactgctgtttgcgccgactc
aattacaagaataaatttgagatgacctacgtgggacccagccaggtcattgttaaaaac
ctctccacgggaacaagagttgtattaaagtcccattatggctacgaggttgatgaggtt
aagattctgggcaaagagagatacctggtggcccacacgtcagacacattgctgctgggg
gatttggccaccaacaggctgagcgaggtggcttggcagggatctggtgggaacgagaag
ttcttctttgataatgagaatgtctgcatgatcttcaacgctggggaactgacgctggtt
gagtacgggagcaatgagattctgggcacagtgcgcactgagtttatgaacccccatctc
atcagtgtgcgcctgaatgagaggagacagcgaggcgcggaggagaataagaagctggcc
tatctcatcgacaggaagaccatagcgatagtggatcttgtggcgggtcataatgttggt
accgttgcccatgacatcaagattgattggctggagctgaatgagaccggccacaagctg
ctcttcagagacaaacaccttcagttaaacctctacgacattgagagcagcaagaagacg
gccattctagattactgctcctacgtgcaatgggttccaggcagtgacgtggtggtggcc
cagaacaggagtaatctctgtgtttggtacactatagactccccagagacagtcaccatg
ttccccctaaagggggacattgtggatctggagaggaaggaaggaaagacagaagtcatt
gtcactgaaggggttaatacgatctcttacacactggacgaggggatgatagagtttggg
acggccatagatgatggagattattacagagccgcagcgtttctggagaccctggagatg
tcaagagagacagaggcaatgtggaggcgcctggccaagctggcactggagggcagatac
ctccttattgctgacaggagttacacggcgctgggcaatgtggccagagcaaagttcctc
cgggagaccaatcggatggctgaagaggctgctaaggaatatgggggagatggaactgat
tattaccaggttcgtgcgcgtctggctgttctggaagagaacttcaaactggcggagatg
atctacctggagcagaatgatgtccttgaagcgatgaagatgtaccatgacttgcactgg
tgggaggagttcattgctgtgccaggagccaaggagcaccccgaatttgagaccctgagg
cggagccacctgcagtacctgaccgagactcaccaggaagagcgagcgggggaggtgttt
gagcaggagggggactatattacggctctgaacctctatttgagagcgggtctccccact
aaggctgcccggctgtgcttggcccatgataggctgctctctgaccccgagctcattggg
agggttacctctgctctcatcaagggggagttctatgagagggctggagatctctttgag
aagataaacaacccccgccgagccctggagtgttactgcaaggacaatgccttccagaaa
gccattgagctcgcgcggggcagcttccccggggaagtggtgaaactggaggagtcgtgg
ggagatttcctggtgcaacagaagcaacaagatgcagcaattaaccattacattgaggct
ggctgctccatgaaagccatagaggcagcacttggggcccgccagtggaagaaagccctg
cacattgtggaacttcaggcaccagaaactgcgcgcagctattacctgaaaattgcccag
cattatgccctcctcaaggagtacgaggtggcagagcatctgtacattaaggccgacaga
accaaggatgccattgagatgtacacacaggccgggcactgggagctggcacactcgctg
gcagtgagatgcatggaacacgaggatgtgtcggggatgtacataggccaagcccgggag
ctggagaaacagggcaaatacaaggaggccgagaggctgtacatcacggtggatgaagca
gatctcgcaattacgatgtacaagaagcacaagatgtacgaggacatgatccgattggtg
cagaaattccatccagatctcctgactgacacccacctacacctgggcaaagagctggag
acggagggaagttaccaagaggccgagtaccattacctggaaggcagtgactggaaggcc
gcagtaaacatgtaccggggggcagacatgtgggaggatgcgcacagggtggctaaatcc
cacggagcggccaatgcccataagaaggtggcctacttgtgggccaagagtttggggggg
gaggcggcagtgaagctactctccaagttcagcctggtggagatggccattgactacgcg
gcagagaactgtacctttgattttgcctttgagctggcgcgcctggccatgaaacccaaa
ctccccgagattcacctgaaatgcgccatattcctggaggatgagggaaagtttgctgag
gctgaggctgaattcgttaaagctgagaagcccaaggaagccgtactcatgtacgtacat
aaccaagactgggactctgcccaacgtgtggccgaactctatgatcccgacagcgtgggg
gacgtactggaaggacaggcccgatttgcctttgagcagaaggagtaccagaaggcagag
gctttcttactgcgggcacatagaccggaactggcggtgcgctactataaggaggctggc
atgtggagcgacgccattcgtatctgcaaggaatacgtcccggcgaggctggagcagctg
cagctcgagtacgagagggacgtgacaaagaaaggtgccagggggacggaggccatgctg
gagcaggcgcgggagtgggaacaggcgggcgaatacacgcgggcggtcgattgctacctg
aaagtgcgcgacacggacaacctgcccctgatggagaagtgctggatgaaggcgggtgag
attgccatcaagttccttccgccggtcaagcgactggaagtagtccgtacggtgggacct
cagctggtatctgtcagcaagcacagcgcggcagcggaactgtacctcaatatggacctg
atcaaggaggcgatcgatgcctttatagaaggggaggagtggaacaaagcaaagagagtg
gccaaagagctggaccccaggtacgaggattatgtggacggacagtacaaagaatatctc
aagaaccagggcaaagtggaatcgcttgtgggcgttgatgtcatggcggcactggaaatg
tatgcagaacgggggcagtgggagaaatgcattgaaacggcagccaagcagaattacaaa
gttctccataaatacgcggcgctattcgcctcccatctcatcaccgagggcaactgggcc
aaagccttgagcctttacgctcagcacggggcccccgccaacccgcagaacttcaacatc
tacaagcggatcttcatggaaatggtgaatgcagagggactgaaccaggcggaggggtac
cacgcgtgggcagaactccgtgataccttgtaccaactgtgtgagaatctcgtcaagtcc
agcgaagtgaactctcaggcccatcaggacttccagcaaatgttactggtcgctcattat
tactccactcgctcagcctctcagggagtcccgccactggaggttgtggcggccaaactg
tccatctctctcctgcgtcacacagacgtcgtccccgcagacaaggctttctatgaagca
ggaatggctgccaagggaatgggatggaagaactcggccttcattttcctcaatcggttt
ctggacctcgtagatgccatcgaggagggcagcctggatgctctggatcattcggatttt
caggacacagacattccctttgaggttcctttacctgcgagacaacatgtgcccgcagag
aaacgagaggaggtgcgagagtgggttctggctgtggctatggaccagcgagtggatcag
gttctgccccaggatgagagaggcacctatgaaggttcccttattgccagaagtagcgga
atccactcactaccttgtctgataactgggttcccggtgctcaggaacaaagtggagttc
aagcagccgggcagcgccgccaacaaggaggattggaacaagttccttatggccgtgaag
accagtcacagcccagagtgccaggatgtgctgcagttcattggccgatggtgcgggggc
ctccccagctccaccttctccttccagtga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF

DBGET integrated database retrieval system