KEGG   Xenopus tropicalis (tropical clawed frog): 100490905
Entry
100490905         CDS       T01011                                 
Symbol
trpc3
Name
(RefSeq) short transient receptor potential channel 3
  KO
K04966  transient receptor potential cation channel subfamily C member 3
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:xtr04040]
    100490905 (trpc3)
Ion channels [BR:xtr04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   100490905 (trpc3)
SSDB
Motif
Pfam: TRP_2 Ion_trans PKD_channel Ank_2 Ank Ank_4 MFS_4 EST1
Other DBs
NCBI-GeneID: 100490905
NCBI-ProteinID: XP_002941939
Xenbase: XB-GENE-1014039
UniProt: A0A803JVP3
Position
1:66726874..66790754
AA seq 917 aa
MSYKGRKCKELPAARVSFPDIGERGSWLARNGGQWAPLPQPRGVLVLPAESSSFMAGGSH
SDCYRFHSTSGDGSPSMRRVTMIREKGRRQAVRGPAFMFNNRGPNLTAEEERFLDAAEYG
NIPVVRKMLEESKTLNVNCVDYMGQNALQLAVGNEHLEVSELLLKKDNLARIGDALLLAI
SKGYVRIVEAILNHPAFAASKRLTLSPCEQELQDDDFYSYDEDGTRFSPDITPIILAAHC
QKYEVVHMLLVKGAKIERPHDYFCKCSDCTEKQKHDSFSHSRSRINAYKGLASPAYLSLS
SEDPVHTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILNGD
VDAEPIESQRHRPSLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQPIAIKCL
VVLVVALGLPFLAVGYWIAPCSRLGRILRSPFMKFVAHAASFIIFLCLLVFNASDRFEGI
KTLPNITVIEYPKQIFRVKTTRFTWTEMLIMVWVLGMMWSECKELWLEGPREYILQLWNV
LDFGMLSIFIAAFTARLLAFMQATKAQQYVDKYIQENDLSLVTLPPEIEYFTYARDKWLP
SDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAF
MIGMFILYSYYLGAKVNSAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIGYVLY
GIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFSIVP
SPKSFVYFILKIINLFKCRRRRLQKDTEIGMGDSKSRLNLFSQSTTRVFESRSFNSIINQ
PTRYQQIMKRLIKRYVLRAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQATEELSS
LIHKLSEKLNPGMLRCE
NT seq 2754 nt   +upstreamnt  +downstreamnt
atgtcatataagggcaggaaatgcaaggagctgcctgcagcaagggtcagcttcccggac
attggggagcgtggaagctggctagcaaggaatggggggcaatgggctccgctacctcag
cccaggggagtgctggtgctgccggcagagagcagctcttttatggccggtgggtcccac
agtgactgttatcgatttcactccacgtcaggtgatggtagcccttctatgaggcgtgtt
accatgataagggagaaaggaagaagacaggcagtccgaggcccagcatttatgttcaat
aacagaggcccaaatctcacagcagaagaggaacggtttctggatgcggcagaatacgga
aacatccctgtagtaagaaaaatgctggaggaatctaagaccttgaatgtcaattgtgtt
gattacatgggtcaaaatgccctgcagctagcagttggaaatgaacatttagaagtcagt
gaactgttactcaaaaaggacaacttggcacgaattggtgatgctctactgcttgcaatc
agcaaaggctatgtgaggatagtagaagccattttaaaccatccagcatttgctgcaagc
aaaagacttacccttagcccatgtgaacaggaactgcaggatgatgacttttattcctat
gatgaagatggaacacgattctccccagatataacacccattattcttgcagctcattgc
caaaaatatgaagttgtgcacatgctgttggtaaaaggcgcaaagatagaaaggcctcat
gattacttctgcaaatgcagtgactgcactgaaaagcaaaagcatgactctttcagtcac
tcacggtccaggataaatgcttacaaaggattagcaagtccagcctatctatcactttct
agtgaagatccggtacatacagcactggaacttagcaatgagctggcaaagttggccaac
attgagaaggaattcaagaatgactatcgcaagctctctatgcaatgcaaggattttgtg
gttggtgttcttgacctgtgtcgagattctgaagaagtagaggccatcttgaatggtgat
gtggatgccgaaccaatagaatctcagagacaccggccctctttaagcagagttaaattg
gcaatcaagtatgaagtgaaaaagtttgtggctcatcccaattgccaacagcagttgctg
accatctggtatgaaaatctctctggattgagagaacaacccatcgccatcaagtgtcta
gttgtactggtcgttgcactagggcttccttttcttgctgttggttactggatcgcacca
tgtagccggcttggcagaattcttcgcagtcccttcatgaagttcgtagctcatgctgca
tcatttattattttcctgtgcctgttagtgttcaatgcctcagataggtttgaaggcatt
aagactctgcccaacattacggtcattgaatacccaaagcagatttttagggtgaaaaca
acaagatttacctggacagagatgctaattatggtatgggttctaggaatgatgtggtca
gagtgcaaagagctgtggctggaaggacccagggaatacattctgcagctatggaatgtg
ctggactttgggatgctctccatctttattgcagcctttacagccagacttttagccttc
atgcaagccacaaaagcacaacaatatgtggacaagtatattcaagaaaatgatctttcc
ttggtcacgctgccacctgaaatagaatactttacatacgctagagacaaatggcttccg
tccgatccacagatcatatcagaaggcctttatgccatagcagttgttctcagcttctca
cgcattgcctatatattgccagcgaatgagagctttggaccactgcaaatatcacttgga
agaactgtaaaagacatttttaaattcatggttctttttattatggtgttccttgcattc
atgattgggatgtttatcctgtattcttattatcttggtgctaaagtgaattctgcattt
acaacagttgaagaaagttttaagaccctcttctggtccatatttggcctgtctgaagta
acatccgttgtactaaagtatgatcacaaattcattgagaacattggctatgtcctttat
ggaatctacaatgtaacgatggtggtagttcttctaaacatgttaattgccatgattaac
agctcctatcaagaaatagaggatgacagtgatgtagaatggaaatttgcccgctccaag
ctatggttatcttattttgatgatggaaaaacgctgcctccacctttcagcatcgtgcca
agtccaaaatcctttgtgtactttatcctaaaaatcattaacttgttcaagtgcagaaga
aggcggctgcagaaagatactgaaataggaatgggagactccaagtctaggctaaatctc
ttctctcagtctactacaagggtttttgagtctcgcagttttaacagtataattaatcag
ccaacacgctatcagcaaataatgaaaagacttataaagagatatgtgttgagagcacaa
gtggacaaagaaaatgatgaagtaaatgaaggtgaattgaaggagataaaacaagatatc
tccagccttcgctacgaacttttagaagacaaatcgcaagctacggaagagttgtcctct
ttgattcacaaactaagtgaaaagctaaatccgggaatgctgagatgtgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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