KEGG T01011: 100491173

Xenopus tropicalis (tropical clawed frog): 100491173

Entry

100491173         CDS       T01011

Symbol

gpc6

Name

(RefSeq) glypican-6 isoform X1

K08112

glypican 6

Organism

xtr Xenopus tropicalis (tropical clawed frog)

Brite

KEGG Orthology (KO) [BR:xtr00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:xtr00535]
    100491173 (gpc6)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:xtr00537]
    100491173 (gpc6)
Proteoglycans [BR:xtr00535]
Cell surface proteoglycans
  Glypican family (GPI-anchored HSPG)
   100491173 (gpc6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:xtr00537]
Others
  100491173 (gpc6)

SSDB

Motif

Pfam:

Glypican

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Xenbase:

UniProt:

Position

2:complement(122737897..123312844)

AA seq 579 aa
MFGMEPVLCWGAVLLSLCAGADVRVRSCSEVRQAYSAKGFSLASVPYQEIAAKRLLYQSQ
GFMKRRKGEHLRICPQEYTCCTSEMEDKLSQQSKLEFESLVEETSHFVRATFVSWHRKFD
EFFRELLKNAEKSLNDMFVNTYGMLYMQNTEVFQDLFTELKRYYTGGNVNLEEILNDFWA
RLLERMFQLINPQYHFSEDYLECVSKYTDQLKPFGDIPRKLKVQVTRALIAARTFVQGLT
VGREVANRVSKISPNPGCIRALMKMLYCPYCRGLPSVRPCSNYCLNVMKGCLANQADLDI
EWNLFIDAMLLVVDRLEGPFNIESVMGPIDVKISEAIVNMQENSVQVSGKVFLGCGQPKS
PPLLRLSRSFSENNNVRFHPYTAEERPTTAAITSLDRLRTLWRTMQNAVIEIKDKLKVSK
KLWSSLPHAICKEVRITGENPNEDKCWNGQTRARYLPEIMNDGLINQINNPEVDVDITRP
DTFIRQQIMALRVITNKLKNAYNGNDVNFQDTSEETSGSGSGSGCTDDICPTEFDFITTE
APLFDSDRGEMDFSAGSQISQSHFTVLICVILVLQRQWR

NT seq 1740 nt +upstreamnt +downstreamnt
atgtttgggatggagccggtgctgtgctggggagcggtgctgctgtcactttgcgccggg
gctgatgtgagagttcgcagttgcagtgaggtgagacaagcatacagcgctaagggattc
agcctggccagtgtcccctatcaggagatagcagcaaaaagacttctgtatcagtcacaa
ggattcatgaagagaagaaaaggggaacatttgcgtatctgtcctcaggaatacacatgc
tgcacttctgaaatggaagacaagttaagccaacagagcaaattggaatttgaaagcctt
gttgaagaaacaagccattttgtccgagctacttttgtgtcatggcatagaaagtttgac
gaatttttcagagaactcctgaaaaatgcagagaagtcacttaacgacatgtttgtgaat
acttatggaatgctatatatgcagaacactgaggtgttccaagacttatttaccgaactg
aaacgttactacacaggaggcaatgtcaacctggaagaaattctcaatgatttttgggca
cggctgcttgaacgcatgtttcagcttataaatcctcaatatcatttctctgaggactac
cttgagtgtgtcagcaaatacacagaccaactgaaaccttttggagatatacctaggaaa
ctcaaagttcaagttacaagagcacttatcgcagcacgaacatttgtccaaggtctcact
gtaggtcgtgaagtagcaaacagggtatccaagatcagtccaaaccctgggtgcattcgt
gccctaatgaagatgctctactgcccttactgtcgcggcctaccatcagtgagaccctgc
agcaattactgtctcaacgtgatgaaaggctgtctggccaatcaggctgacttagacatt
gaatggaatctcttcatagatgccatgctgttggtagttgacagattagagggaccattc
aatattgagtcagttatgggccctattgatgtgaaaatttctgaagccatcgtgaacatg
caagaaaacagtgtgcaggtgtcaggaaaggtctttttaggatgtggccagcccaagtct
ccaccattactacggctttcacgatcattttcagaaaataacaatgtgcggttccatccc
tacactgcagaggagagacccacaactgctgcaatcacaagccttgacagactgaggact
ttatggaggacaatgcagaatgctgttattgaaatcaaagacaaactgaaggtatcaaag
aaattgtggtcgagtttgccacatgcaatctgtaaggaagtgagaataacaggagaaaac
ccaaatgaagacaaatgctggaatgggcagactagagctcggtatctgcctgaaattatg
aatgatggacttataaatcagatcaataacccagaggtggatgtagacatcacaaggcca
gatacattcataagacagcaaatcatggcactccgagtgattacgaacaaactgaagaat
gcatacaatgggaatgatgtcaacttccaggatacaagtgaggaaaccagtggctcagga
agtggcagtgggtgcactgatgatatctgtccgactgagtttgactttatcaccaccgaa
gcaccactttttgactcagacaggggggagatggacttttctgcaggatcacagattagc
cagtcacatttcacagtgctcatatgtgtcatcctggtactacagagacaatggagataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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