KEGG   Xenopus tropicalis (tropical clawed frog): 100491842
Entry
100491842         CDS       T01011                                 
Symbol
rev1
Name
(RefSeq) DNA repair protein REV1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    100491842 (rev1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtr03400]
    100491842 (rev1)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    100491842 (rev1)
SSDB
Motif
Pfam: IMS IMS_C REV1_C UBM BRCT POLH-Rev1_HhH BRCT_2 LIG3_BRCT PTCB-BRCT DUF4261
Other DBs
NCBI-GeneID: 100491842
NCBI-ProteinID: XP_012813138
Xenbase: XB-GENE-968197
UniProt: A0A6I8SCC8
Position
2:112552881..112603271
AA seq 1233 aa
MRRGGWRNRASDKDGWGVWGGYMAAKVQKLDEQFRSDAPLQQQKDGTSSKIFNGVSIYVN
GYTDPTADQLRHLMMLHGGQYHVYYSRSKTTHIIATNLPNNKIKELRDEKVVRPEWITES
IKAGRLLSYVPYQLYTKQSSVQKGLNFTSMFKRDDPLPGPSNISRDFSQRENSTTKDFFA
RPSSVPDGLEEDEHKNGDFEMLDLEQIFSDHKPNGLQNHIDNTAVYIKHTPISNGALKPL
DSTVQLNSSFARRLDLLQSQEKPDQDCVDNTDCTVEHLQPNSRQTDVFCNPHRTSSLPSS
SCLHTNSKINGAHHSLPGPSSTSTTALSPAKLASLQLPKTADPNFISDFYSHSRLHHIST
WKCEFTEFVRGLQTQSNKGFPGRERLKKLKPGNMPPSTLPKCQNCIIHVDMDCFFVSVAI
RNRPDLKGKPVAVTSNRGAGTTTTREGANPQLEFQYYQNRILKGKAEIPNEQDQPTSISS
DSAQQNGLDLDISHLSMAEIASCSYEARQAGVKNGMFFGKAKQLCPELQAVPYDFDAYKE
VAMTMYRILASYTHDIEAVSCDEALADITGILTETRLTPDEASNAIRTEVKEKTGCAASV
GIGSNILLARMATRRAKPDGQYHLKPEEVDDFIRGQLVNNLPGVGRTIEYKLSCLGVKTC
GDLQNITMAKLQKEFGPKTGQMLYRFCRGLDDRPIRKEKERKSVSAEINYGIRFTQTSEA
EAFLINLSEEIQRRLEVVGMKGKKLTLKIMVRKAGAPIEPAKYGGHGICDNVARTVTLHQ
ATASAKVIGKEAVDMFHTMKLNISDIRGVGLQMHQLVPVHGLSSLGSTLVKSGPLPGGSR
SLMDMFQGQKMKSISEEHDGKKDIVAAVDFEIASASGTCSSIPHYNKSSQEPSTSKAAFT
GQRNGFHSPVNVKSGLNFTIEVPSPSQVDPSVLEALPPDIREQVEQTVGFRQWRAMESKN
YPAQEGSSELKQQPVATVLLQIPNLSDQGEEQGINVIALPAFSQVDPEVFAALPADLQEE
LRAAYGQRNKETDNNINSTFVSKNPLLQLRKPLEKSKKRSRKKNKGSPTKRIHSPLKTIL
FSSPLKNGFSAGSPQKLKDVPLKQEAKPSGQSQVELGPSTSNDAKLLAQNHNSFKSKPPN
LAGAVEFNDVKTLLREWITTISDPMEEDILQVVKYCTDLIEEKDLEKLDLVIKYMKRLMQ
QSVESVWNMAFDFILDNVQVVLQQMYGSTLKVV
NT seq 3702 nt   +upstreamnt  +downstreamnt
atgcgtcgagggggatggcggaatcgagccagcgacaaagatggatggggtgtctggggt
ggatacatggcagctaaagtgcagaaattagatgagcagtttcgatcagatgctccattg
caacagcagaaggatggaacctcgtccaagatctttaatggggtttctatatatgtcaat
ggatatactgatcctactgctgatcagctgcgtcatctaatgatgctgcatggaggacaa
taccatgtttattattctcgatctaaaacaacacacatcattgcaacaaacctcccaaat
aacaagatcaaggaattaagagatgagaaagttgtccgaccagagtggataacagaaagc
ataaaagctggccgcctactttcatatgttccctaccagttgtatacaaagcagtccagt
gttcaaaaaggcctaaattttacctccatgttcaagagagatgatcctttaccagggccc
agcaatattagtagagatttcagccaaagagaaaacagtacaacaaaggatttctttgca
aggccaagcagtgttccagatggactggaagaagatgagcacaaaaatggtgattttgaa
atgttggatttggagcaaatattttctgatcataagcctaatggactacagaaccacata
gacaatacagctgtgtatattaaacacacccccatctctaatggtgccttaaagccactg
gatagcacagtgcaattaaatagctcttttgcaaggagacttgatttgttgcagtcacag
gaaaagcctgatcaggactgtgttgacaatacagactgcactgtggagcatttgcaacca
aacagcagacaaacagatgttttctgcaatcctcataggacttcatccttaccctcatcc
tcatgtttgcacacaaattcgaaaattaatggtgctcaccactcgcttccggggccttca
agcacaagcactactgcactctcccctgccaagctggcctctctacagctgcctaaaaca
gctgaccccaattttatttcagatttttattctcactccagacttcatcatatatcgacg
tggaagtgtgagttcactgagtttgtgcgcggtctacagactcaaagtaacaaaggcttc
ccaggtcgggagaggttaaaaaaattaaagcctggtaatatgcctccttccacattaccg
aagtgccagaactgtatcatacacgtagatatggactgcttctttgtatctgtggctatt
cgcaaccgtccggacctcaaaggaaaaccagtcgctgttacaagcaacagaggtgctgga
acaacgacaacgcgggaaggagctaatcctcagctagagtttcagtattatcaaaacagg
atactaaagggaaaagctgagattcctaatgaacaagatcagcctacatctatcagttca
gattctgcacaacaaaatggtctagacctggatatttcacatctatccatggcagaaatc
gcatcttgcagttatgaagcaaggcaagctggagtgaaaaatggaatgttctttggaaaa
gctaaacagttatgtcctgaactccaagctgttccctatgattttgacgcatacaaagag
gtcgccatgaccatgtacagaattttagcgagctacactcatgatatagaggcagtgagc
tgtgatgaagcacttgctgatattactggaatccttaccgagacaagacttacacctgat
gaagcatcaaatgctattcgcacagaggttaaagagaaaactgggtgtgctgcatccgtt
ggcataggttccaatattctgctggctagaatggcaacacgtcgtgctaaaccagatggg
caatatcatttaaaaccagaggaagtggatgattttattagaggtcaactagttaataac
ttgccaggagttggcaggactatagagtacaaactatcatgtcttggagttaaaacctgt
ggtgatctccaaaatattacaatggcaaagctccaaaaagaatttggtccaaaaacagga
caaatgttgtaccgattttgtcgtggcctggatgatcggcccatacgaaaagagaaggaa
agaaaatctgtgtctgctgaaattaactatggcatccgctttactcagacaagtgaagca
gaagcttttcttataaatctttctgaagagattcaaagaagacttgaagttgtaggtatg
aaaggcaagaaattaactctgaaaattatggtgagaaaagctggtgccccgatagagcct
gcaaaatacggtggtcatggaatctgtgacaacgttgcaaggactgtgacccttcaccaa
gcaacagcaagtgccaaggttattggaaaagaagctgtggatatgtttcatacaatgaaa
ctgaacatctctgatataagaggagttggactccaaatgcaccaacttgttccagtacat
ggactgtccagcttgggttccacgttagtaaaatctggtccgttgcctggtgggtcacgt
tcactaatggatatgtttcaagggcaaaagatgaagagcatctctgaagagcatgatggc
aaaaaggatattgtcgctgctgtggattttgaaatagcatcagcatcaggcacttgttct
tccatcccacattataataaatccagccaagaaccaagtactagcaaagcagcattcact
ggccaaaggaatgggtttcactctccagttaatgtgaaatcaggactcaattttaccatt
gaagttccatccccttcacaggttgatccttctgttttggaagcactgcctcctgacata
agagaacaagtagagcaaacagttggtttccggcaatggagagcaatggagagcaaaaat
tacccagcacaggagggcagtagtgagctaaaacaacaaccagtagcaactgtgctgctg
cagatcccaaatctgtcagatcaaggagaggaacaaggcattaatgtcattgctctccca
gccttttcacaggttgatccagaagtatttgctgccttgcctgctgatctccaggaggaa
ctaagagctgcatacggccaaaggaataaagagactgataataacatcaactcaacattt
gtttcaaaaaatccattgctacagttaagaaagcctttggaaaagtcaaagaaaaggagc
agaaagaaaaataagggcagcccaaccaaaaggattcacagccctttaaaaaccatactc
tttagcagtcccctcaaaaacggcttttctgctggcagccctcaaaagttaaaggatgtt
cccctaaaacaagaagccaaaccttctgggcagtctcaggttgaactaggtccttccact
tcaaatgatgcaaaattattggctcaaaaccacaattccttcaagtcaaaaccacctaac
ctcgctggtgcagttgaatttaatgatgtgaagaccttattaagagagtggattaccacc
atttctgatcccatggaagaagacatactgcaggtagttaaatactgtactgatcttata
gaagaaaaggacttggagaaactagatttggtcataaagtacatgaaaaggttaatgcag
caatctgtggagtctgtatggaacatggcatttgacttcattctggacaatgttcaggtt
gttctacaacaaatgtatggaagcacactgaaagttgtttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (10)   
   Pfam (10)   
All databases (26)   

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