KEGG   Xenopus tropicalis (tropical clawed frog): 100492169
Entry
100492169         CDS       T01011                                 
Symbol
arhgef28
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
  KO
K21072  A-kinase anchor protein 28
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100492169 (arhgef28)
Membrane trafficking [BR:xtr04131]
 Others
  Rho GTPase associated proteins
   Rho guanine nucleotide exchange factors (GEFs)
    100492169 (arhgef28)
SSDB
Motif
Pfam: PH_16 RhoGEF C1_1 PH Ank_2 C1_2 PH_13 PHD HEM4 Prok-RING_1
Other DBs
NCBI-GeneID: 100492169
NCBI-ProteinID: XP_002934885
Xenbase: XB-GENE-952324
UniProt: A0A6I8SM83
Position
1:183372226..183503852
AA seq 1667 aa
MMELSLSEVPLYGQMIVFATFGQDLHLPEDAEFYFVYNGSSQRHVIFAERLASNVLRSVF
PGHNCPESVIVTVCMHTEGYSPVIVACTPVTYIRDTACNISHYLKMHCGSLSPTSHETIL
THFGLTVKDLLHMDRNMMLCLASEESKPIWNILGSASESGSFRGETLLHLTARWGLEEVS
HFLMYQPGGVCGLHTENEDQETPIDIAARSGHIGLVARLRNFQDAPPLDFFTVVIGEDSF
LRFCHSTTVLTLTRLQPQGKSLESDIELFRKCLWDSRFIEKITNPMQNQDHKILNQPDEI
HREEDKRYSSIDVLKKLKHPPTFLAASRLSAMLNGNDEVYANSMVVDEVTDSEINYIHVD
NANTEGSPTHRSDSTLTDKANNYSVCASPERNRPEVNNVDQADLPAFLSPSHLYSGAARR
QSRTLGYATERNTACNVIKRRSSSLDGLDADSEGEGTYPRYSSGSSIKQDSPGLLGNSGD
ELDSPERNAEPDFPIRGVGTLPLQGKDPLGTGVRLRSYSCSSPKLSVGIPRIARDLSVSD
TSEDGVVSFSGRSLLQALSLSKSVYLLHPGKQRAYSLPDQLREKRIEEEEWDKYATPTKP
ESEKNKVSRTFSFLRNRMTSTRNKNKVKNKDMKEKVNRHQFVTGTFSGVVPCLVCEKALL
GKESLQCSSCNVNVHKGCKESAPHCTKRFQERYHPKNKQSAVISNSSYKDIPQQVQPTMH
TSTSVPLGLSSGKKETIHSTPLHSKTIPVLSSDRRSDPSLESDGDTSGCRSRSQSEELLQ
TLGTPPSMDCFPIEDVVDTTLWSDFSNDMQEFEAESWSLVVDPLFCEKQKKDVIKRQDVI
FELIQTELHHVQTLLIMSEIFRKGMKEELQLDHSTVDKIFPCLDELLEIHKQFFSNLKER
KQESREGNDKNFIINRIGDILVQQFSADSANKMKKIYGEFCSHHIEALNLFKELQQNKKF
QNFIKLRNRNLLARRRGIPECILLVTQRITKYPVLVERILKYTTEGTEEHTDLCKALVLM
KELLAAVDLQVNKFEKGQKLLEILNKIENKTCTKLKNGLEFRKQDLTSKERALLHEGVVF
WKTATGRFKDIQALLLTDILLFLQEKDQKYIFAAVDQKPPVICLRKLIVREVANEERGMF
LISASSAGPEMYEIHTNSKEERNGWMRQIQEAVQSCPQEDEGKSCESDEDKRVAEARAVK
AQKYHDTLTLQDQNICNTLEEKLQIYAELAALNTKSDMHLEPHLFIKADSGEIPQAAALL
AAALKEAENLHSTIKSQMEDPSWLPEYERSTPRRCRSVETLDEEPETSYNSQSPDARERR
KLSYDASISHVKSDRDLDFTEEIEECMQSPSYNQDEVLQVVHNLTRLLYSIQATVAMQDS
HIELHKAFLQDYELGSRGSRGSILNEHEKYRNLEKHRCEMVNLHKLQQQLHQEQQRWLRE
CDQKQRENEEKESMLQHREQECQSQEHLLHQKREELDQQQQEFQQNVERLQEGHRLVERE
KEDLAVKLKLWRHFNNHQPRSLLTEGVGSRRSVSLQDEDSVYINSALAQISLNTITTFPA
PDYPNAHLFHSPSSLLAQSTEKNTTDTANEPWSSVVSRHQRLEGSSLISRHNKDACNNDL
NAAHVISCGTLLSVPNATQPVEPQTKPAEETSHHLENGKIEENIVYL
NT seq 5004 nt   +upstreamnt  +downstreamnt
atgatggaactcagcctatccgaagtgcctctctatggtcagatgattgtatttgcaact
tttgggcaagatcttcatctgccggaagatgcagaattctactttgtttacaatggatcc
agccagaggcacgtaatatttgcagagcgcctcgcttcaaatgtcctgcgctctgttttt
ccaggccacaattgcccagaatctgtaattgttactgtgtgtatgcacaccgagggctac
tcacctgtgatcgtggcttgcacgcctgtaacatacataagggacacagcatgcaatatc
tcacactacctgaaaatgcactgtgggagtctatcccccaccagccatgagacaatactc
actcattttggactgactgtcaaggatttgctccatatggacagaaacatgatgctgtgc
ctcgctagtgaagaatcaaagcctatctggaatatccttgggtcggcttctgaatcaggc
agctttcgtggcgagactttacttcacctgacagcaagatggggattggaagaagtctct
catttccttatgtaccagcctggtggagtgtgtggattacatacagaaaatgaagatcag
gagaccccaatcgatattgcagctcgcagtggacacatcggattggttgcacgcttacga
aattttcaggatgcgccaccccttgactttttcacagtagtcatcggagaggattccttc
ttacgcttctgtcattcaaccactgtgctgacactgactcggcttcagcctcaggggaag
tcgctggagtctgacattgagctcttcaggaaatgtttgtgggactcccgcttcattgaa
aagataacaaacccaatgcaaaatcaggatcacaaaatactgaaccagcccgatgaaata
catagagaagaagataaaaggtattcatcaatagatgtgctcaagaagttaaaacacccg
cctacatttcttgctgcatccagactttctgccatgctgaatggaaatgatgaggtgtat
gccaacagtatggtggtggatgaggtgactgattcagagatcaactacattcatgtggac
aatgccaatactgaaggctcacctacacaccgttcagactccaccctgacagataaagca
aataattatagtgtttgtgcatctcctgagagaaacagaccagaagtaaacaatgtggat
caggcagacctgcctgctttcctttcaccttcccacctgtactcaggtgcagcacggaga
caaagcagaaccctgggctatgctactgaaaggaacacagcttgtaatgtcataaagaga
agaagctcaagtcttgatggtctcgatgctgacagcgaaggagaaggaacatatccaaga
tatagttctgggtcatccattaaacaggactcccctggtcttctgggaaacagtggggat
gaacttgactctcctgaaagaaatgctgagcctgactttccaattagaggagtgggaaca
ttgcctctgcagggaaaggatccactgggcactggtgttcgattgcgttcatactcgtgt
tcctcgccaaagctttctgttggaatacctcgcatagcaagggacctctccgtcagtgac
acaagtgaggatggtgtggtcagcttcagtggtcgctcactcctccaagcactttcattg
tctaaatcagtatatcttcttcaccctggtaaacagcgggcgtatagcctccctgatcaa
ctgagagaaaaaaggattgaggaagaggaatgggataaatacgcaactcctacaaaacca
gaatctgaaaagaacaaagtcagccggacatttagcttcttgcggaacaggatgaccagc
accaggaacaaaaacaaggtgaaaaataaggatatgaaagagaaggtgaacaggcatcag
tttgtgacgggcacgttctctggggtggttccatgtttggtgtgtgagaaggcactcctg
gggaaggagtctctgcagtgctccagttgtaatgtgaatgtacacaaaggctgcaaggaa
tctgctccccattgcaccaagcgatttcaggaacgatatcacccaaagaacaagcagtcg
gcagttatatcaaattcatcatataaagatatcccacaacaagttcaacctacaatgcat
acttctacatctgtgcctctgggtctctcctcgggcaagaaagagaccattcactccact
cccctgcattctaaaaccatccctgtgttaagctctgatagaaggtctgacccctctctg
gaatcagatggggacaccagtggctgcagatcgagatctcagtcggaagagctgctgcaa
accttgggcacacctccatccatggactgcttcccaattgaagatgtagtagatacaacg
ttatggagtgacttcagtaatgacatgcaggaattcgaagccgagtcatggagtcttgtg
gttgatccattattctgtgaaaagcaaaagaaagatgttataaagagacaagatgtcatt
tttgaactgatccagacagaactccatcacgtccagacattgttgattatgtctgagata
ttcagaaaaggaatgaaagaggagcttcagttggaccacagcacagtggataaaatattc
ccttgtctggatgagctgctggagatccacaagcagttcttctccaaccttaaagaaagg
aaacaggaatctagggaaggaaacgacaaaaactttatcatcaacagaattggagatatc
ctcgtgcaacagttttcagcagacagtgccaataaaatgaagaagatctatggagagttt
tgcagtcaccatatcgaagcactgaacttgtttaaggagctacagcagaacaagaaattc
cagaactttattaaactaaggaaccgtaatctcctggcacgccgacggggtatcccggaa
tgcatccttcttgtaactcagcgcatcacaaagtatccagtgcttgtggaaaggatatta
aaatacaccaccgaagggacagaggagcacacagatctctgcaaagccctggtgttaatg
aaggagctgctggcagcagtggatttgcaggtcaataagtttgagaaaggacaaaagctg
ctagagattctgaataaaattgaaaataaaacttgcaccaaattaaagaatggcctagaa
ttcagaaagcaggacctgacgagcaaagagcgggcgctgctgcatgagggagtggtgttt
tggaaaacggctaccgggcgctttaaagatattcaagcacttctgttaacggacatcctg
ctgtttctacaagagaaggatcaaaagtatatttttgctgcagtggaccagaaaccccca
gttatttgccttcggaaactgattgtgcgagaagtagcgaatgaggagcgcgggatgttt
ttaataagtgcctcatccgctgggcctgaaatgtatgagatccacaccaattccaaggaa
gagcgcaatggctggatgaggcagattcaggaggctgtacagagctgtccgcaggaagat
gaaggtaaaagctgtgaatcagatgaagataaacgggtggcagaggccagagcagtgaag
gctcaaaagtatcatgatacgctgaccctccaagatcagaatatctgtaatactttagag
gaaaaattacagatctacgcagaacttgcagccttaaacacaaagagtgacatgcacttg
gaacctcacctttttatcaaagccgattcaggggaaatccctcaggcggcggctctgctg
gctgctgcactcaaggaagctgaaaatctccactcaaccattaaatcacaaatggaggat
ccatcttggttacctgaatatgaaagaagcactccgagaagatgtcgttctgttgaaaca
ttagatgaggaaccggagacatcatataactcccagagcccagatgcaagggagagaagg
aagctttcctatgatgccagtatttctcatgtgaagagtgacagggatctggatttcaca
gaagaaattgaggaatgtatgcaaagtccaagctataatcaggatgaagttctacaagtg
gtgcataaccttactcgcctgctgtacagcatacaggctactgttgctatgcaagatagc
cacatagaactgcataaagctttcctacaggattatgaattgggcagtagaggttcccgt
ggaagtatacttaatgaacatgagaagtatcgcaacctagaaaagcaccgctgcgagatg
gtcaatttacataaactccagcaacagttgcatcaagaacaacaacgctggctgcgcgag
tgcgaccaaaaacagagggaaaacgaggagaaggagagcatgctccagcatagggagcaa
gagtgtcagagtcaggaacatctcttgcaccaaaagagggaggaacttgaccaacagcag
caagaattccagcaaaacgtggagcggctacaggagggtcatagacttgtggagagggag
aaggaggatctggctgtgaaacttaagctttggaggcactttaacaaccatcagccaagg
agtctattgactgagggtgtcggaagccgtcgctctgtcagtttacaagacgaagactct
gtgtatattaacagtgccttggctcagatatcactcaacaccatcacaacatttccagcc
ccagactacccgaatgcacatttgtttcacagccccagttcactccttgcacagtctact
gagaaaaacacaacggacactgctaatgagccttggagctctgtggtctctcgccaccaa
agacttgaaggatcttcactcatttcccggcacaacaaggatgcatgtaacaatgatctg
aatgcagctcatgttatttcctgtggtacgctcctgtctgtgcctaatgcaacgcagcct
gtggaaccacagaccaaacccgcagaagaaacctcacatcatttggaaaatggcaaaatt
gaagagaacatagtttacctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (10)   
   Pfam (10)   
All databases (29)   

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