KEGG T01011: 100492195

Xenopus tropicalis (tropical clawed frog): 100492195

Entry

100492195         CDS       T01011

Symbol

fbxo40

Name

(RefSeq) F-box only protein 40

K10315

F-box protein 40

Organism

xtr Xenopus tropicalis (tropical clawed frog)

Brite

KEGG Orthology (KO) [BR:xtr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xtr04121]
    100492195 (fbxo40)
Ubiquitin system [BR:xtr04121]
Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     100492195 (fbxo40)

SSDB

Motif

Pfam:

F-box_4 zf-TRAF_2 F-box F-box-like

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Xenbase:

UniProt:

Position

2:complement(3117023..3124137)

AA seq 692 aa
MGRTHRPPAGHHQHCERCFNKRCQAPINSGFSCIMINCRSNCGATFHLCKEEEHRLLCPY
EWVPCLNSGFGCPFSMSRFKLAKHLKVCPASVVCCSMEWNRWPVMDKVTSLYGNIASEEH
SDECLDVALAIRDQKILFDSLKMAEIFPELSEQPNDAAAQGANIEAEEDGAVGGTAFSMS
GGTEPSDGETVGLTQFEREALARGQVALDTSLFSQWESIFSKEKSAAQCLEANMGKTEAA
TPKDSTKIDDSPKAAEENQDPDGARKGSISEDFEKTGLAPWQEGVLERLKNEVDCNSYNM
YLVHHGSMLIRFGQMAACTPKEKDFVYGKLEAQTVKTVYTFKVPTSYCGRRAKLGEERSR
KEKAHKLVDTCDLGVQVGDLPLSGAVNTTLLCALERELKGHAISESKALDGLLIDFGTQT
YDFGLDAFTKKTVLADLLPEKNLGIHLDLESESVSRRHNKSNSSFTFSCNLFFRRDEFPQ
HFRNAHSDIQSCLNGWFQQRCPLSYLGCTFVQNKLSPKGKKSHIIYSKQLKTFALKPEVP
HTLYEGVRPNLSLSQRGKSKDSLSSLPLEVLQHIAAFLDSFSLCQFSQVSSLMRDVCASL
LQERGMVHLFWEKKTYSHGGTSWRCRRKVWNFSSLFSSVHQWEFDDVPSMAEHLKVCPFN
CPELRTNPVKLPSLNEQKEAATESLLNFQKKL

NT seq 2079 nt +upstreamnt +downstreamnt
atgggaagaacacatcgcccccctgcaggccatcaccagcactgcgagaggtgcttcaac
aagcgatgccaggcaccaatcaacagcggcttctcttgtatcatgatcaactgccgctcc
aactgtggcgccaccttccacctgtgcaaagaggaggagcatcgactgctgtgcccctac
gaatgggtgccctgcctgaactccggctttgggtgccctttctccatgtcccgattcaag
ctggcaaagcaccttaaggtgtgtccggccagtgtggtctgctgttctatggaatggaac
cgttggcccgttatggacaaagtaacctcattatacggcaacattgcgagcgaggagcac
agcgacgaatgtctggacgttgccttggcaataagggatcagaagatcctatttgattcc
ctgaaaatggcagaaattttcccagaactctcagaacaacccaatgatgcagcagcccag
ggagcaaatattgaggcagaagaagatggagcagttggtggaacagcgttcagtatgagc
ggcggcacggagccgagtgatggggagacggtcggactcactcagtttgaacgtgaggct
ttggccaggggacaagtagctcttgatacgtcactattctcccagtgggaatccatattc
agcaaagagaaatcagcggcgcaatgtttggaggccaatatggggaaaacggaggccgcg
acccccaaagacagtacaaaaatagacgacagccccaaggctgcggaggagaaccaggat
ccagacggggcaagaaaagggtccatttcagaagattttgagaaaacgggtttagccccg
tggcaggaaggggtactggaaagattaaagaatgaagtggattgtaacagttacaacatg
tacttggtgcaccacggcagcatgctgatccgcttcggccagatggcggcgtgtaccccg
aaagagaaggactttgtctacggcaagctggaagcacaaacagtcaaaaccgtctacacg
ttcaaagtgcccaccagctactgcggcaggagggccaagcttggcgaggagcgctctagg
aaggagaaagcacacaagttggtggacacgtgtgacctgggggtacaggtgggagatttg
cctttatccggagccgtaaacaccactctactctgtgccctcgagagagaactcaaaggc
catgccatctccgagagtaaggccctcgatgggctactgattgactttggaacccagacc
tatgatttcggcttggacgccttcaccaaaaagactgttttggcagatcttttgccggag
aagaatctgggaattcacctggatttggaatcggaaagtgtaagcagaaggcacaacaag
agcaactcttccttcaccttctcgtgtaacctgttcttccgccgggatgaattcccccag
cactttaggaatgctcactcggatatccagtcctgcctgaatggatggttccagcagagg
tgccccctttcatacctcggttgcacctttgtgcagaataagctcagccccaaggggaag
aagtcacacattatctacagcaagcagctcaaaacatttgcactgaagccggaggttccc
catactttatatgaaggagtacggcccaacctttccctgagtcaaaggggcaaaagcaag
gactccctgagcagcctccccctggaggtcttgcagcacattgcagctttcctggacagt
ttcagcctgtgtcagttctctcaggtgtcttctctgatgagagacgtctgtgcctcgttg
ctacaggagaggggaatggtccatctgttctgggagaagaagacttattcccatggtggg
acgtcatggagatgtcggagaaaggtctggaacttcagcagtctcttctcctcggtccac
caatgggaatttgatgatgtcccttcaatggctgaacatctcaaggtttgtcccttcaac
tgcccagagctcagaaccaatccggttaagcttcccagtctcaatgaacagaaggaggca
gccacggagtctctgttaaacttccagaagaagttgtag

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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