KEGG   Xenopus tropicalis (tropical clawed frog): 100492659
Entry
100492659         CDS       T01011                                 
Symbol
itgb2
Name
(RefSeq) integrin beta-2 isoform X4
  KO
K06464  integrin beta 2
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04145  Phagosome
xtr04514  Cell adhesion molecules
xtr04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100492659 (itgb2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100492659 (itgb2)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100492659 (itgb2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100492659 (itgb2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xtr04147]
    100492659 (itgb2)
   04515 Cell adhesion molecules [BR:xtr04515]
    100492659 (itgb2)
   04090 CD molecules [BR:xtr04090]
    100492659 (itgb2)
Membrane trafficking [BR:xtr04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    100492659 (itgb2)
Exosome [BR:xtr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100492659 (itgb2)
Cell adhesion molecules [BR:xtr04515]
 Integrins
  Integrin beta subunits
   100492659 (itgb2)
CD molecules [BR:xtr04090]
 Proteins
  100492659 (itgb2)
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt PSI_integrin I-EGF_1 EGF_2 DUF5305
Other DBs
NCBI-GeneID: 100492659
NCBI-ProteinID: XP_012826644
Xenbase: XB-GENE-988513
UniProt: A0A6I8Q6V6
Position
9:complement(55129617..55192199)
AA seq 774 aa
MKEMRWTYLILVVQYVLFIFPTVTATSKVCTKFKVSNCNECIQSGPFCAWCKQPNFTSAG
EPDSVRCDTDEVLGKRGCKEVDIVYHDSRSVVKDRTRLSDRVQLTPREISLQLRPGKAAE
FDVTFRRAQGYPVDLYYLMDLSYSMNDDLQNVKNLGSNLLEALNKITTSAQIGFGSFVDK
TVLPFVNTHPEKLKNPCPERNENCQPPFAFKHILKLTEDGKQFQDQVGKQGISGNLDAPE
GGLDAMMQVAVCGDKIGWRNVTRLLVYATDDGFHIAGDGKLASILIPNDGQCHLEDNLYK
RSNEFDYPSVGQLAQKLSENNIQAVFAVTSNMVQTYRNLSKLIPKSVVGELSSDSRNVVQ
LITDAYQALSSEVILDHGTTPDFLEILYDSLCPGDIKENQLKGMCSNVKIGEEIKFKVKV
TASKCLQDQSFAIRPLGFTDTLTVSVRTLCDCECDETPRPGDCNSNGTIKCGICSCNEGF
VGKNCECVTGGKTSQELEQSCKKENGSAVCSGAGDCICGQCTCHTNEDTSKKIYGQYCQC
DNWNCELFEGRLCAGQGTCDCGVCRCNEGYEGSACQCKRSTSNCKNAKGSVCSGRGKCEC
NNCICKPGYLQPHCESCPGCPSPCSKFGPCVECYINQEDGSTQNCSHLCPGVKAERVEEL
KRETVCKEKDSSNCWMQYVIVEDDGEDKFTITYTLKRECPEAPNFVAIVGGTTAGVILIG
MACLIIWKIITEIKDRNEYNRFEKERQNCKWNQASNPLYHKATTTVQNPNFSGE
NT seq 2325 nt   +upstreamnt  +downstreamnt
atgaaggaaatgcgctggacatatcttatcttggtggtgcagtatgttcttttcattttc
ccaacagttacagcaacttctaaagtctgcaccaagtttaaagtaagcaactgcaatgaa
tgcatccagtctggtccattctgtgcctggtgcaagcaacctaacttcaccagtgctgga
gagcccgactcagttcgctgtgacacagatgaggtactgggcaagagaggctgtaaagaa
gtggatattgtctaccatgatagtcgttctgttgtgaaagatcgaacaaggctgagtgac
agagtacagctaacaccaagagaaatctctctccagttgagaccaggcaaagctgcagaa
tttgacgtgacatttagaagggctcaaggatatccagtggatctctactacctgatggat
ctttcctactctatgaatgatgatcttcagaatgtaaagaatttaggaagcaacctcctg
gaagctttgaacaaaatcacaacttcagcacagataggttttggttcatttgtggataaa
acggtgttaccgtttgtgaacacacacccagagaaactgaagaacccatgcccagagagg
aatgagaattgtcaacccccatttgctttcaaacacattctcaaactcacagaagatgga
aagcaatttcaagatcaagttgggaagcagggcatttctggaaatctagatgccccagag
ggagggcttgatgctatgatgcaagtggcagtttgtggggataaaataggctggagaaat
gttacaaggcttctggtatatgcaactgatgatggtttccatattgctggagatggtaaa
ctggcatccattcttattcccaatgatggtcaatgtcacctggaggacaacctgtacaaa
agaagtaacgagtttgattacccatcagttgggcagctggcccagaagctctcagagaat
aacattcaggctgtgtttgctgtcacatctaatatggttcagacatacaggaatcttagt
aaattaatccccaagtcggttgttggagagttatcctcagattccagaaatgttgtgcag
ctgatcacagatgcttaccaggctttatcttcagaggttattctggaccatgggaccaca
ccagattttctagagattctgtatgattctctatgccctggagatataaaagagaaccag
ctgaagggcatgtgcagtaatgtgaagattggggaggagatcaaattcaaagtgaaagtg
acagccagcaagtgcctccaggaccagagctttgcaattcgccctttgggatttactgac
accctgactgtgagcgtcagaactctctgtgactgtgagtgtgatgagactcctcgacct
ggagactgcaactcaaatggaaccataaagtgtggaatctgcagctgcaatgaaggtttt
gtggggaagaactgtgagtgcgtcacaggggggaaaacaagtcaggaactggagcagagc
tgtaagaaggaaaatggttctgcggtctgttctggggcaggggactgtatctgtggacag
tgcacctgccatactaatgaagatacttcaaaaaagatctatggtcaatactgccaatgc
gacaactggaactgtgagctgtttgagggcaggctgtgtgcagggcagggaacctgtgac
tgtggagtctgtagatgcaatgaaggttatgaaggcagcgcttgtcagtgcaaaagatca
acatcgaactgtaagaatgcaaaggggagtgtatgcagtggaaggggcaaatgtgaatgt
aacaactgtatttgtaagccaggatacctccagcctcactgtgagagttgccctgggtgt
ccatccccctgctcaaagtttgggccctgtgttgaatgctatataaatcaagaagatgga
agcacccagaactgttcacatctgtgtcctggtgtaaaagctgagagagtagaagaactg
aaacgtgagactgtgtgcaaggagaaggacagcagtaactgctggatgcagtatgttatt
gtcgaagatgatggagaagacaaatttactattacctacacattaaagagagaatgcccc
gaagcccccaactttgtggcaatagtaggaggtaccacagctggtgtgatattgattgga
atggcctgcctgatcatctggaaaattattacagaaataaaagacagaaacgagtacaac
aggtttgaaaaggaaagacaaaactgtaaatggaaccaggcaagtaatcctttgtatcat
aaagctacgaccactgtacaaaatcccaactttagtggagagtga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (13)   
   UniProt (1)   
   RefSeq(pep) (12)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (6)   
   Pfam (6)   
All databases (45)   

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