KEGG   Xenopus tropicalis (tropical clawed frog): 100492840
Entry
100492840         CDS       T01011                                 
Symbol
matn4
Name
(RefSeq) matrilin-4 isoform X1
  KO
K19467  matrilin
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:xtr04990]
    100492840 (matn4)
Domain-containing proteins not elsewhere classified [BR:xtr04990]
 Von Willebrand domain-containing proteins
  VWA domain-containing proteins
   100492840 (matn4)
SSDB
Motif
Pfam: VWA FXa_inhibition cEGF VWA_2 EGF_CA EGF_3 hEGF EGF Matrilin_ccoil EGF_MSP1_1 DUF4217 DASH_Hsk3 RANK_CRD_2
Other DBs
NCBI-GeneID: 100492840
NCBI-ProteinID: XP_002938060
Xenbase: XB-GENE-990978
UniProt: A0A6I8QGQ7
Position
10:complement(12608845..12655056)
AA seq 702 aa
MKMLYISTLLLITLAALEARPQTAGLVQKCKSGPMDLVFIIDSSRSVRPFEFETMRKFMI
DIINSLEVGLSTTRVGVVQYSSQVQTVFSLKTFSNKSDMEKAINEIIPLAQGTMTGLAIQ
YAMNVAFTEEEGARPLSKNIPRVAIIVTDGRPQDRVTEVAVQAREAGIEIYAVGVQRADV
SSLRAMASHPLDDHVFHVESFDLIQHLSIQFQDKLSCVDMCTEMDHGCQHKCVNIPSSYY
CECNEGYKLNADGKTCSLIDLCAQGNHGCEQICVSSPGSYSCTCRAGYQLNEDKKTCSLI
DLCSQGNHGCEQICVSSPGSYSCACRAGYQLNEDKKTCSMIDLCSQGNHGCEQLCISSLG
SYTCACRSGYQLNNDKKTCSMIDYCSYGNHSCQHECVSILNGYYCRCNEGYTLQADGKTC
VADDMCNIVDHGCEFKCVSTPGSYYCICPEGQELQADGKTCNKCSTGYIDLVFVIDGSKS
VRPQNFELVKEFVINIVDSSAISAQGTHIGLVQYSSRVRTEFPLSQYTNGQDIKTAVKNI
QYMEKGTMTGLALKHMVEQSFSEAEGARKNVPKIGLVFTDGRSQDDISEWAKKAKEAGIT
MYAVGVGKAVEDELNEIASDPVNKHSFYTADFSTMNLIAEDLKLNICPEEIKGTTETKNP
CDCEHLVSFQTSTIAKLESLSEQLVQLNARLEDLENQLVSKK
NT seq 2109 nt   +upstreamnt  +downstreamnt
atgaagatgctctacatatcaacgctgcttctcatcactcttgcagccctggaggccagg
ccgcagacagcaggcttagtacaaaaatgtaaatctggtccaatggatctggtcttcata
atcgatagctcaagaagcgtccggccattcgagtttgaaaccatgagaaagtttatgatt
gatatcattaattctctagaagttggcctcagcaccaccagggtcggggtggttcagtat
tctagccaagtgcaaactgtgttctctctaaaaactttctccaacaagtccgacatggaa
aaggccatcaatgagatcattcccctggcacaaggaacaatgactgggctggcaatacaa
tacgccatgaatgttgctttcactgaagaggaaggagcccgacctttgtccaaaaatatt
ccaagagtagccatcattgtgactgatgggagacctcaggatcgggttacggaagtggct
gttcaggctcgggaggcaggcattgaaatctacgctgttggagtacagagagcagatgta
tcttctctaagagcaatggcctcccatcctcttgatgaccacgtcttccacgtagaatca
tttgatcttatacaacacttgtctattcaattccaggacaaattatcatgcgttgacatg
tgcactgaaatggaccatggatgtcagcataaatgtgtaaatatccctagttcctactac
tgtgaatgtaacgagggctacaaactcaatgcagatgggaagacatgttctttgatagac
ctctgcgctcaaggaaatcatggctgcgagcagatctgtgtgagctccccaggatcctac
tcttgcacatgtcgggcagggtaccaactcaacgaggataaaaagacttgctcactgata
gacctctgttctcaaggaaatcatggctgcgagcagatctgtgtgagctccccgggatcc
tactcttgcgcatgtcgggcagggtaccaactcaacgaggataaaaagacttgctcaatg
atagacctttgctcgcaaggaaatcatggctgtgagcaattgtgtatcagctcccttggt
tcctatacttgtgcttgccgttcagggtaccaacttaacaatgataaaaaaacctgctca
atgattgactactgctcctacggcaatcacagctgccagcacgaatgtgtgagtatactg
aatggatattactgtcgctgcaacgagggctacactttacaagccgacggcaaaacatgc
gtagctgatgatatgtgcaacattgtggaccatggatgtgaatttaagtgtgtcagcacc
cctggatcatactactgcatctgtccagagggacaggaactccaggcagatgggaagacc
tgcaacaaatgctccactggttacattgatttagtatttgtgattgatggttccaagagt
gtccgacctcaaaactttgagctggtaaaggagtttgtaatcaatattgtggattcctcg
gccatctctgcacaaggaacacacatcggtctggtccagtactccagtcgcgtccgaaca
gaatttcccctcagtcagtatacaaatggccaagatatcaagacagctgtgaagaacatt
cagtatatggagaaaggcaccatgaccggcctagcactgaaacacatggtggagcaaagt
ttctctgaggcagaaggagcaagaaaaaatgtacccaaaattggcctggtattcactgat
ggacgttctcaagatgatatctctgaatgggctaagaaggctaaggaggctggcataacc
atgtacgccgtgggtgtcgggaaggctgttgaagatgaactaaatgaaattgcttctgat
cctgttaacaaacactccttttacacagcggattttagcacaatgaatcttattgctgag
gatttaaagcttaacatttgcccagaggagattaaaggtacgactgagacaaagaacccc
tgtgactgcgagcacctcgtcagcttccagacaagcaccattgcaaagctcgagagcctt
tcggaacaactggttcagctgaacgcaagactcgaagatctggaaaaccagctcgtcagc
aaaaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (13)   
   Pfam (13)   
All databases (28)   

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