KEGG   Xenopus tropicalis (tropical clawed frog): 100493203
Entry
100493203         CDS       T01011                                 
Symbol
yod1
Name
(RefSeq) ubiquitin thioesterase OTU1
  KO
K13719  ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100493203 (yod1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:xtr01002]
    100493203 (yod1)
Peptidases and inhibitors [BR:xtr01002]
 Cysteine peptidases
  Family C88
   100493203 (yod1)
SSDB
Motif
Pfam: OTU OTU1_UBXL zf-C2H2_2 CcmH zf-met
Other DBs
NCBI-GeneID: 100493203
NCBI-ProteinID: XP_002932168
Xenbase: XB-GENE-998960
UniProt: F7ECX1
Position
2:62951740..62954855
AA seq 329 aa
MTQCLSCIIADNSYSISSAFIYLCIMLRLRCKTREGTQLLQGLTDRSSIRELQERIAGLT
GISGPQQRVMVGFPPASLDLSDGEATLKNLPIKSGDTLIVEEDKSKLKSEIPPVSKTDLG
NWNAPAQPTIVRRVVPADNSCLFTSIYYVVEGGVYDPACAPEMRNLIAEIVASDPSTYCE
AVLGKSNEEYCTWIRREDTWGGAIEVSILSKFYQCEICVVDTQTVRIDRFGEDSGYTKRV
LLIYDGIHYDPLQRLFADLDMPPMTVFSTTDDEALVQAMELADDARKKRQFTDVNQFALR
CMVCQKGLTGQSAARDHAKETGHTNFGEV
NT seq 990 nt   +upstreamnt  +downstreamnt
atgactcagtgcctttcctgtattatcgccgacaatagttactctatttccagtgctttc
atatatctgtgcattatgttgcggcttagatgtaaaacccgagagggtacccagctccta
caaggtctcacagaccgctccagtatccgggagttgcaggagcgcatagcaggtcttaca
ggtatttcagggccccagcagcgcgttatggtgggctttccccctgcttccctggacttg
agcgacggagaggcgacactaaaaaatctgcccatcaaatctggggacacacttattgtg
gaagaagataaaagtaagctgaaatcagaaattccgccagtttccaaaactgaccttggt
aattggaatgcaccagcacagccaacaattgtccggagggtagttccagcagataattca
tgtctgttcacaagcatttattatgtggtagaagggggtgtttatgacccggcatgtgcc
ccagaaatgcgcaacctcattgcggagattgtggccagtgacccatctacttactgtgag
gctgttcttgggaaaagtaatgaggaatattgcacatggattagaagagaagacacatgg
ggaggtgctattgaagtttccattctatccaaattctaccagtgtgagatttgtgtggta
gacactcagactgtacggatagatagatttggggaagattctggttacactaaacgagtt
ttactcatttatgatggtatccactatgatccattacaacgtctgtttgcagatcttgac
atgcctccaatgactgtcttttcgacaacagatgatgaggctcttgtccaggctatggag
cttgcagatgatgctaggaagaagaggcagtttacagacgtaaaccaatttgcattgcgt
tgtatggtgtgtcagaaagggttgactgggcaatcagctgcaagggatcatgctaaggag
acagggcacacaaattttggtgaggtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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