KEGG   Xenopus tropicalis (tropical clawed frog): 100493280
Entry
100493280         CDS       T01011                                 
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein
  KO
K10890  fanconi anemia group C protein
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    100493280 (fancc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtr03400]
    100493280 (fancc)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     100493280 (fancc)
SSDB
Motif
Pfam: Fanconi_C DUF530
Other DBs
NCBI-GeneID: 100493280
NCBI-ProteinID: XP_012827012
Xenbase: XB-GENE-986037
UniProt: F6XZ87
Position
1:complement(135690639..135759998)
AA seq 548 aa
MAQAIPVLGLEFWLKKAQEWDQTVILESQKDVCLHLPKLQEFLQQVYETLKHMSPSAAVE
QFPPIGQLLGRLCENKFVVGHEETRNALIHCLCCLQSSEPKSAVELAANSWVKNLLCHLF
CSSEAIGHEENQSINKIGCTTVDYHSKLLKNTITSWIKQLTKPENSNSENKLSGDNIRAL
SIRCIPILTLPDLIPLLEALLLYHGSEPKEVLDDEFLDRVNDAILRKKILLSESAVLSLW
LRHLQSLEKAVLDLFQRLIAIQSKSLKEMEQIINDSFLVQAAQYPSIFRIIDNIFRNAIL
ESDGNIKIITVVRLFTHVFLQLYQKNNTQVRFPLKAYFPHSNRSLVMALIRRPVGLPPDV
CLAHLQSIIRMLSPVAKETRSRGSVFEWFLLIHFGDWVDIAAELLMTSESESADDLLWLL
AFYYNPWNENEETNRTMAASRSVYERLLPLRSSASVCASKLQTLLEEEKRSACHPCTLQL
YRHLFIFFLLFSPDWHVTAKEFIAHMTQTQEAAREVSDILARTVWRLSIPGMKTPKLITI
VHELLHDF
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggcccaggctattccagtgttgggtttagaattctggctcaagaaagctcaagagtgg
gatcaaacagtcatattggaatcccagaaagatgtctgccttcacttgcctaaattacag
gagtttttgcaacaagtttatgaaactctaaaacatatgagtccaagtgcagcagttgag
caatttcctccaatcggtcagcttcttggaaggctgtgcgaaaataaatttgttgtgggg
catgaggaaacaaggaatgcattaattcattgtttgtgttgcttgcaaagcagtgaacca
aaaagtgctgtggagctagcagccaatagttgggttaagaacctcctttgtcatctgttt
tgctcatctgaagcaattggtcatgaggaaaatcagtctatcaacaaaattggatgcaca
actgttgattatcatagcaagcttttgaagaatacaatcacatcctggattaaacagctc
accaagccagagaacagtaacagtgaaaataagctttcaggggataatatacgtgcatta
tctattaggtgcatcccaattctcacgttgcctgacctaatacctttgctcgaagcactc
ctcttgtatcatggttctgaaccaaaggaggttctggatgatgagtttttagatcgtgta
aatgatgcaatactgaggaagaagatattgctaagtgaatcagcagtacttagcttgtgg
cttcgtcatttgcagagccttgaaaaagctgtgctggatctatttcagagattaattgcc
atccaaagcaaatcattgaaagaaatggaacagattataaatgattcattcttggttcaa
gctgcccagtacccatccatcttcaggattattgacaacattttcaggaatgctattctg
gagagtgatgggaacatcaaaataatcacagttgtgcggttatttactcatgtattcctc
caactttatcagaagaataacacacaggttaggtttccattgaaggcttactttccacac
agcaaccgttccctagtgatggcattgatcaggcggccagtagggctgcctccagacgtc
tgccttgcacacctgcagagtattattagaatgctaagccctgtggccaaagagacaaga
tcccgcggaagtgtctttgagtggtttttactaattcattttggagactgggtggatata
gcagcagaattgctgatgacgtcagaaagtgaaagtgcagatgacctgctatggcttttg
gcattttactataatccatggaatgagaatgaagaaacaaatagaacaatggctgcttca
agaagtgtttatgaacgcttgttaccgcttcgcagcagtgcttcggtctgtgcatcaaaa
ttacaaaccctactggaagaagaaaaaagatctgcttgtcatccctgtacattgcagctt
tataggcatctctttatcttcttccttctattctctccagactggcatgtcactgccaaa
gagtttatagctcatatgactcagactcaggaagctgccagggaagtttctgacatactg
gctagaactgtatggagacttagtattcctggaatgaaaactccaaagttaatcacgata
gtgcacgagctgcttcatgacttttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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