KEGG   Xenopus tropicalis (tropical clawed frog): 100493458
Entry
100493458         CDS       T01011                                 
Symbol
thsd4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
  KO
K23377  thrombospondin type-1 domain-containing protein 4
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    100493458 (thsd4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:xtr04990]
    100493458 (thsd4)
Domain-containing proteins not elsewhere classified [BR:xtr04990]
 Thrombospondin domain-containing proteins
  ADAMTS-like proteins
   100493458 (thsd4)
SSDB
Motif
Pfam: TSP1_ADAMTS ADAMTS_spacer1 TSP_1 TSP1_spondin ADAMTS_CR_3 TSP1_CCN PLAC
Other DBs
NCBI-GeneID: 100493458
NCBI-ProteinID: XP_017947904
Xenbase: XB-GENE-6035027
UniProt: A0A6I8R7I7
Position
3:98298973..98653733
AA seq 988 aa
MVDCLIVSLRLVSSIVFLGVQLVVSQQSIDHRKVPQRIEKQSDTAENITTVPSGTWGTWG
PWSACSRSCSGGVMEQTRPCLPAHYQQRSFQAPSQQYSTGERTHSNQNNLHHDTVINPYA
GHVVSAIRTSIPLHRRGENPQFNIQSSGDLSQNHHNRGILRGGRQPLIPGHIPRHEKRNR
TRGLISPGSYGYGKVPYGLPLQRDTGQEARRTRRQRQSVRQSTYKQSTDALVNQRQATYS
QVSSVPQGLYPDISRHGLASLQLLQEKPQVPRGATAITCIGPYKQYKLCNKNLCPGSNRG
IREVQCASYNNKPFMGRLYEWEPFTEEKGALKCELTCRAVGYRFYVRQAEKVIDGAPCDD
NGTAVCVSGQCKNIGCDDYLGSDKVLDKCGVCGGDNTACKVVSGVFKHVLIKVGYHKVVE
IPEGATKINVTEMTKSNNYLALRSRSGRSIINGNWAIDRPGRYEGGGTMFTYKRPNEISS
TAGESFLAEGPTNEVLDVYMIHQQPNPGIHYEYVIPAENAISPQLPPHRRPVEPFNGQLE
ETSDPTENGDSFSEIDTESFPGRHPGRYPSHQPDNQVLPLQPPRRSRDFNWKQVGSTECS
TTCGKGSRYPVFRCVNRNTHEETADGFCDASAKPSAEEEPCNLFPCPAFWDIGEWSECSK
TCGLGMQHRQILCRHSYANRTLTVQPHRCQSLEKPETTSTCQLKICSEWQIRTDWTPCSV
PCGVGQKTRDVKCISNIGDIVDDEECNMKLRPDDIENCDMGPCAKSWFLTEWSDRCSAEC
GEGVRTRSVVCMSNHISSLPLEGCGNHRPPETTTCNNGPCEGKVEWFMGSWSQCSVECGT
GTQQRDVICIKKTAEGFNVVNPNECSYLERPPNQQSCHLKSCGAKWFYTDWSTCSKSCEG
GFRIREVRCLADDMSHSDKCDQELKPEDTESCNTQDCMPEIDENCKDKYYNCNVVVQARL
CVYAYYKTACCASCLRAASRQSGFLGRR
NT seq 2967 nt   +upstreamnt  +downstreamnt
atggtagactgtttgattgtatctttacgattggttagctcgattgtttttttaggagtt
cagctggttgtctcccagcagtccattgatcacagaaaggttccacagaggatagagaag
caaagtgacacggcagaaaatattacaacagtgccatctggcacctggggaacttggggt
ccttggtcagcttgctctagaagttgcagtggaggtgttatggaacaaacccggccatgc
cttccagcccattaccagcaaagaagcttccaggcccccagccagcagtactcaactgga
gaaagaactcacagcaaccagaataatcttcatcatgacactgtaattaatccttatgct
ggacatgttgtgtcagccatccggacatccatacccctacacagaagaggggaaaatcca
caattcaacattcaatcttcaggagatttaagtcaaaatcatcataacagaggaatactg
aggggaggcagacagccgctgataccagggcatattcctaggcatgaaaaaagaaacaga
acccgaggtctaataagtccaggatcctatgggtatggaaaagtgccgtatggattgcca
ctacaaagggatacaggtcaggaggctcggagaacccggaggcagcgtcagtcagttcgc
cagtctacttataaacagagtacagatgcactagttaaccagcggcaggccacctattca
caagtgtcctcagtaccccagggcttatacccagatatttccagacatgggttggcatcc
ctccagctattgcaggagaaaccgcaagtgccacgtggggccacagcaataacatgcatt
ggaccctacaaacagtacaagctgtgtaataaaaatctgtgtcctgggagcaacagaggc
atcagagaagtgcagtgtgcatcctataataacaaaccctttatggggagattgtatgaa
tgggaaccatttacagaagaaaaaggtgcattaaagtgtgagctgacttgcagagctgtg
ggctacaggttctacgtgaggcaagctgagaaggttatagatggagcaccttgtgatgac
aatggcacggctgtttgtgtttctggtcagtgtaagaacattggctgtgatgactatttg
gggtcagataaagtgcttgacaaatgcggcgtctgcggaggagataacacagcttgtaaa
gtagtctccggagtcttcaagcatgtattaataaaagtagggtaccataaagttgtggaa
attccagaaggtgccacaaaaataaatgtgacagagatgacaaaaagtaacaactattta
gccctacgcagtcgatcgggcagatcaatcatcaatggaaactgggcaattgacagacct
ggcagatatgaaggaggtggaaccatgttcacatataagagaccgaatgaaatttcaagc
actgcaggcgaatcatttttagctgaaggccccacaaatgaggttcttgatgtttatatg
atacatcagcagccaaaccctggaattcattatgagtatgttattccagcagaaaatgcc
atcagccctcagctacctcctcatcgacgaccagttgaaccatttaatggccagttagaa
gaaacctcagaccctactgaaaatggagattcctttagtgaaatagacactgaatctttt
cctggtagacatcctgggagatatccttcacatcagccagataaccaagtacttccatta
caaccacccaggcgaagccgagacttcaactggaaacaagtggggtcaacggaatgttca
actacgtgtgggaaagggtcccgctacccagtgtttcgctgtgtaaacagaaatacacat
gaagagacagcagatggtttctgtgatgccagtgccaaaccaagtgcagaagaggagcct
tgcaatctctttccttgcccagccttctgggatataggagagtggtctgaatgcagtaaa
acctgtggtctgggaatgcagcaccgacaaatcctgtgcagacacagctacgctaaccgc
actctaacagtacagccacaccgctgccagagcctagagaagccagagaccaccagtacg
tgccaactaaaaatctgcagtgaatggcaaataaggacagactggacaccttgttcagtg
ccctgcggggtgggacagaagacccgtgatgttaagtgcattagtaacattggggatatt
gttgacgatgaggagtgcaacatgaagctacgtccagatgatattgagaactgtgacatg
ggtccatgtgcaaagagttggttccttacagaatggagcgacaggtgctctgcagaatgt
ggagaaggtgtgcggacacggtctgtggtatgcatgtccaaccatataagcagcttgcct
ttagaagggtgtgggaaccacagacctcctgaaactacaacatgcaataacggaccttgt
gagggcaaagtagagtggtttatggggagttggagtcagtgttctgtggaatgtggtact
gggacacagcagagagatgtcatttgcataaaaaagacagctgagggtttcaacgtagtg
aatccaaatgaatgttcctatttggaacgaccccctaaccaacaatcctgccacctcaaa
tcctgtggagcaaagtggttctacactgactggagtacatgctctaaatcttgtgagggg
ggatttcgaatccgcgaggtacggtgtcttgcagatgacatgtctcacagtgataagtgc
gatcaggaattaaagccagaagacacggagtcctgcaatacccaagactgcatgccagaa
atagatgaaaactgcaaagacaaatactacaactgcaacgtggtggtacaggccagactg
tgtgtttatgcttattacaagacggcttgttgtgcatcctgcctacgggcagccagcaga
cagtcaggatttttggggagaagataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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