KEGG   Xenopus tropicalis (tropical clawed frog): 100493473
Entry
100493473         CDS       T01011                                 
Symbol
stx16
Name
(RefSeq) syntaxin-16 isoform X1
  KO
K08489  syntaxin 16
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    100493473 (stx16)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100493473 (stx16)
Membrane trafficking [BR:xtr04131]
 SNARE
  Syntaxin (Qa)
   Stx-TGN / EE
    100493473 (stx16)
SSDB
Motif
Pfam: SNARE Syntaxin MCPsignal Syntaxin_2 Sec10_N ETRAMP Prominin TRP Orf78
Other DBs
NCBI-GeneID: 100493473
NCBI-ProteinID: XP_031750392
Xenbase: XB-GENE-5943021
UniProt: A0A803KFA1
Position
10:2858468..2871622
AA seq 323 aa
MATRRLTDAFLLLRNNAAHNRHILAEQVSNERRPGSARSPGAELDELADDRMALVSGLSL
DPEAAIGVTKRLPPKWVDGVEEIQYEVTRIKQKMKDLASLHDKHLNRPTLDDSTEEEHAI
EITTQEVTQMFHRCQRSVQSLQSRCRHCTEQEERLLRNVVSSLAQSLQDLSTNFRHTQSG
YLKRMKNREERSKHFFDTSVPLMDDGEDNTLYDRGFTEDQLVLVQQNTLMVEERERELRQ
IVQSISDLNEVFRELAGMVVEQGTVLDRIDYNVEQACVKTEDGLKHLQKAEQYQKKNRKM
LVILILFVVVIVLIVVLIGVKSK
NT seq 972 nt   +upstreamnt  +downstreamnt
atggcgacccgccggctgaccgacgccttcttactattgcggaacaatgcggcccataac
cggcacattctggccgagcaagtgagtaatgagaggcgcccggggagtgcgcggagcccg
ggagcggaactggatgagctggccgatgatcgcatggcattggtgtccgggctgagcttg
gatcccgaggcggccattggtgtgaccaagcgtcttcctcccaaatgggtggatggggtg
gaggagatccagtacgaagtcacacggataaagcagaagatgaaagacctggcgagtctg
cacgacaagcacctcaaccgcccgacgttagacgacagcacagaggaagagcacgccata
gaaataactactcaggaggtcacgcagatgtttcaccgctgccagcgctccgtgcagtcc
ttacagagccggtgccgacactgcacggagcaggaggagcgactgctgcggaatgtggtc
tcttcactggcgcagtcgcttcaggacctttccaccaacttccgacatacgcagtccggg
tatctgaaacggatgaaaaaccgagaagagaggtccaagcattttttcgatacgtcggtt
cctcttatggatgacggggaagacaatactctgtacgatcggggctttacagaggaccag
ctggtcctggtgcagcagaacacattaatggtggaagagagagagcgagagctgcgccag
attgtacagtccatctctgatctgaacgaggtgtttagagagctggcgggaatggtggta
gaacagggcacggttctggacagaattgactataatgtggaacaggcttgtgtgaaaaca
gaggatggtttgaaacacttacagaaggcggagcagtaccagaagaagaaccgcaagatg
ctcgtcattttaattttgtttgtagtcgtgatagtcctcattgtcgtgttgattggcgtc
aagtccaaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system