KEGG   Xenopus tropicalis (tropical clawed frog): 100493655
Entry
100493655         CDS       T01011                                 
Symbol
ino80d
Name
(RefSeq) INO80 complex subunit D
  KO
K11668  INO80 complex subunit D
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100493655 (ino80d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xtr03036]
    100493655 (ino80d)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Chromatin remodeling factors
   INO80 complex
    100493655 (ino80d)
SSDB
Motif
Pfam: zf-C3Hc3H zf-primase Gemini_C4
Other DBs
NCBI-GeneID: 100493655
NCBI-ProteinID: XP_002936433
Xenbase: XB-GENE-6041462
UniProt: A0A6I8Q373
Position
9:50722766..50762200
AA seq 1024 aa
MYEGKHIHFSEVDNKPLCSYSPKLCKQRRLNGYAFCIRHVLEDKTAPFKQCEYVAKYNSQ
RCTNPIPKSEDRRYCNSHLQVLGFIPKKERKKKNDALEDVKARHQMETMAFSLTVPPLKM
PNGLDGMNLSPPGARLPINYLETDLEDPFSFEEEKQELKKGTSVKKKLQSKLAQNRQRLR
ETEIVNVHQEHFSPHPAPSPLHSPSLQEQHALVQPISTLSKPTGIPQNLVCKSPQPPNTS
QPVQGVSPVTNTVAQTRHQSSKRPFSVLPPVTELPRTDRIQLAATALPAYSYYVSRLQRL
VKLCTRKQQLDTDLFPHFGLDWSEDSGEEQEDSDQTSPYRTAWSFRESFQYDCKKLDIEE
AHGRSSRIAQLCTYFQQKYKHLCRLERAESCQKKYRHTFRRALQQAALREPETTGQLLQE
LRRTTCIRTRPIQPELRETEVTLCSATISNRTCKNRALPYSRNCFQHILSNSSQQLFSSC
TAKFADGQQCSVPVFDIIHQTPLCEEHAKKMDNFLRGDNSRKVQHQQQRKPRKKTKPPAL
TKKNKKKRRRGPRRPQKPIPPAVPQGNLCMPSSLSLPMEVSSLRSPSTPDLSTEELPDDI
TSEITDIPHDLELNQEDFSDVLPRLPDDLQDFDFFEGKNGELLPTTEEAEELERALQAVT
SLECLSSIAVLTQADNAAGQDLSDRGIAAFSTGSGGSVIQSLSREDQTDLGDLLNGRIGH
NNFTSLELDENLLGSTTLSSPSAPLSGHIQGQFSSPANVGLSSATLISQSSLGERALPGT
FHGLHEGNSAPQRTLQAEILIKADDLITSQQQYNSDHSHSSPQGSHYDSEHVPSPYSDQI
TSPHATSYSADSLSAAFSSDVPIITQHLLTTQLNMPLSGVVNRTHWGNLPVNLSDPSGFS
TFITSDGHLLSTSLSTPPATSHSETTQPTFSTVTPNSSNMLPGLPQTSFSGLSPPASELM
DSASLKHQLPQFIAAFGHQLTSHSGIPKDLQPSHSSIAPPTGFSVTGATSTTTTNASSSF
ASPN
NT seq 3075 nt   +upstreamnt  +downstreamnt
atgtatgaaggcaaacacatacacttttccgaggttgacaacaagcccctttgctcctat
agcccaaagctttgtaagcagcgaagactcaatggttacgccttctgtatccgccacgtt
cttgaagataagacagcacctttcaagcaatgtgaatatgtggccaagtacaatagccag
cgttgcactaaccccatccctaaatctgaggaccgtaggtactgcaatagccatctgcag
gttctcggatttattccaaaaaaggaaaggaagaaaaagaacgatgcactggaggatgtg
aaggccaggcatcagatggaaaccatggcttttagccttacggtgccacccttgaagatg
cctaatggacttgatggaatgaatctctctcccccaggggccaggcttccgattaactat
ttagaaactgacttggaagatcctttcagttttgaggaagaaaagcaagagctaaagaaa
gggacatctgtaaagaaaaagctccagagcaaattggctcaaaaccggcagcgtctaaga
gagacagaaattgtaaatgttcatcaagagcactttagccctcatcctgcaccttctcca
cttcattctccatctttgcaggagcagcacgcacttgtacagccaatttcaaccttgtcg
aaacccactgggataccacagaatttggtctgcaagtcacctcaacctccgaacaccagc
caaccagtacagggagtatcgcctgtcacaaacacagtagcacaaacaaggcatcagtct
agcaagagacctttttctgtcttacctcctgttacagaattgccacggactgacaggatc
cagttggcagccaccgccttaccagcttactcatattatgtgagccgactgcagagacta
gttaaactgtgcacacgaaagcagcagctggatactgatttattcccacattttggtctg
gactggtcagaagacagtggagaagaacaggaggacagtgaccaaacatccccataccgc
actgcgtggtcattcagagagagtttccaatatgactgcaaaaagctagatattgaagaa
gcgcacggtaggagctccaggattgcacaactttgcacttactttcagcaaaaatacaag
cacctctgccgcctggagcgagcagaatcctgtcagaaaaaatacagacatacattccgg
agagccttacagcaggctgccctcagagaaccagagaccacagggcagctgcttcaggaa
ctgcgaagaaccacatgcataaggaccaggccaattcaaccagaattgagagagacagaa
gtaaccctttgcagtgcaactatcagtaacaggacatgtaagaacagagccctaccctac
tcacgcaactgctttcagcatatcttgtccaacagctcccaacagcttttttctagctgc
acagcaaagtttgcagatggccagcaatgttctgtgcctgtttttgatattatacatcag
actcctttgtgtgaagaacatgccaagaaaatggataacttcttgcgaggggacaattcg
cgtaaagttcagcaccagcaacaaaggaaacccaggaaaaagaccaaaccccctgcgctt
accaaaaagaataagaagaaaaggaggcgaggtccacgacggcctcagaaacccattcca
cctgctgtgccccagggcaacctgtgtatgcccagcagcctttcactgccaatggaggtc
tccagcctaaggagtccttccacaccagatctgagcacagaagagctgcctgatgacatc
actagtgagataacagacattccccatgacttagagctcaatcaggaggacttctcagat
gttctgccacgtctgcctgatgatctgcaagactttgacttctttgaaggtaaaaatggt
gaacttcttcctaccactgaagaagctgaagagttggagagggccctgcaagcagttaca
tctctggaatgcttaagctctatagcagtgctaactcaagctgacaatgcagctggccaa
gacctgtccgatcgtgggatagcagcattctcaaccggttctggaggctcagtaatacaa
tcactgagtcgggaagatcaaacagaccttggagatctactcaatgggcgtataggtcat
aataacttcaccagtctggaattggatgagaacctacttggttctactaccttatccagc
ccatcagcacccctgagtggacatattcaggggcagttctcatcacctgccaatgttggc
cttagttctgccactttaatcagccagagctcacttggtgagagagctttacctggtaca
tttcatggtcttcatgaaggtaacagtgcaccccaaaggacacttcaggcagagatcttg
atcaaggcagatgatctaatcacctcacagcagcaatataatagtgaccattcacattct
tcaccccaaggaagccattatgacagtgagcatgttccctctccttatagtgaccaaatt
acatccccacatgccacctcctactctgctgacagtttgtctgctgccttctcttcagat
gtacctattattacacagcacttactaaccacccagctgaatatgcctctgagtggagtg
gtgaaccgaactcactggggaaatctgccagttaatcttagtgatccatcaggtttcagt
acgttcatcacttctgatggacacctgctttcaacatctttgtccaccccaccggctact
tctcattcagagacaacacagcctaccttctccactgtgacccccaatagctctaatatg
cttccagggttaccacagaccagctttagtggcctaagtcccccagcctctgaactcatg
gactctgcatccctcaaacatcagctccctcagttcattgcagcatttggccatcagctg
acctctcacagtggcatccccaaagaccttcaacccagccatagttccattgctcctcct
acaggattttctgtaacaggtgccacatctacaactaccaccaacgcttcctcctcattt
gcaagtcctaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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