KEGG   Xenopus tropicalis (tropical clawed frog): 100494064
Entry
100494064         CDS       T01011                                 
Symbol
gli1
Name
(RefSeq) zinc finger protein GLI1
  KO
K16797  zinc finger protein GLI1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    100494064 (gli1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xtr03000]
    100494064 (gli1)
Transcription factors [BR:xtr03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 GLI-like
    100494064 (gli1)
SSDB
Motif
Pfam: zf-C2H2 zf-H2C2_2 FOXP-CC Zap1_zf1 zf-C2H2_4
Other DBs
NCBI-GeneID: 100494064
NCBI-ProteinID: XP_002939471
Xenbase: XB-GENE-482644
UniProt: A0A6I8QGB6
Position
2:140318308..140391620
AA seq 1371 aa
MASRQCPPAAVFNSMNPPVNSYVEHCYLRSPNVMAEGMNEMPYCHQTNLMTSHHGFGLAQ
ASDHLAGTDVSRFSTPRNTMKLSKKRAMSISPLSDASIDLQTMIRTSPNSLVAFINSRCS
SASGSYGHLSIGTISPSLGYQNCLNHQRPQGGSYGNNPLMPYNSHDHMSSRGVGMLQPRS
SIKHCQLKSEPLSSTGLDPIGSKRLEDGSEGDISSPASVGTQDPLLGLLDGRDDLEKDDG
KHEPETVYETNCHWESCTKEFDTQEHLVHHINNEHIHGEKKEFVCHWQDCSRELRPFKAQ
YMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNA
SDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHITKKHRGDGMPRT
QSGHEGSGNHTVKGENQLDMEASSARKEDGRLAVPDITLKSQPSPGGQSSCSSERSPLGS
TNNNDSGVEMNANTGGSFEDLTNLDDIPSVDSIGTAGASALRKLENLRIDKLNQLRKAPS
SGKMVKLPSIHNSGPQGDMSVVCGPLGMSHNQHGIELPSSSHVNHLNDRRNSTTSTMSSA
YTVSRRSSVVSPYLPNQRAGDSGNMVDSYDISTDPSGHSNEAVCASGLPGLTPAQQYRLK
AKYAAATGGPPPTPLPNMERMNSNNRMAFASSDYRGSSMSSLLANNIHRRHSSNEYHNYG
TGIIHPAQAPGAGIRRASDPARTGGDIQTVPKVQRFKSMTNMNVSMMGRQASGIQQAYGG
SDANLQRHMFSPRPPSISENVFMETAGPDGVCHSKDHSIIQPNEMQHYVNYQGQGSQLAA
PSDHMNFNHQIHGIDGQSQNVYGHSQRAMSNMHLNSENYSSQSNVPTQTNFNQCQMTGQS
QHFQNTRQAYSSSNLPVQWNEVSSGTMDNPGQSPNHQIMHQNMPPGNHCQSQFSNSVVPE
TTKQGCPVNRSSCQQGMYMNNQKYNHGGQVQVKPEQQFHHSAPTMMSCQNMKHPSRQEHN
FTQSNTMLLSPESTNCDFQGQQDNTQNSCFNVGLNPNLLSPQGRRSQTPMMQVKEMMVRN
YVQSQQALMWEQHPKSMAMMNNSGEDVDTGQNQHKNTPNAAVYMSPKYINYQCKPSPNNL
MSPSSQDSQSSHTKTMGSPSSQCYNYDMLPHPPCGPKPLSRQHSISSQSTYMGSPNQHSP
SYQPSETSPRRMACLPPIQPQSEVSNNTSMMYYTGQMEMHHGKAGVHKLATSLNQNQTSC
DGQQHGQYSSNHSFLKTDSVPYTSSCPGANTLDSLDLENTQIDFTAIIDDADNTLMSGNI
SPNGLAGTSPGSSHLTTLRNTGAVVPNMVVGDLNSMLTSLTGENKYLNTIS
NT seq 4116 nt   +upstreamnt  +downstreamnt
atggcgtcccgccagtgtccaccagctgctgtgtttaactccatgaaccctccagtcaac
agctatgtggaacattgctacctgaggtctcctaatgttatggcggaaggaatgaatgaa
atgccctattgccatcagaccaaccttatgaccagtcaccatggatttggattggcacaa
gccagcgatcacttggcaggcacagatgtatcccgtttctctacacctcgaaatacaatg
aagctgagcaaaaaaagagctatgtcgatctccccgttgtccgatgccagcattgatcta
caaaccatgatcaggacctcccccaattccttggttgctttcattaattctcgatgttct
tccgctagtggatcttatggacatttgtctataggaactatcagcccatctcttggttat
caaaattgccttaaccatcagaggccacaagggggatcttatggaaacaacccactcatg
ccttacaactcccatgaccacatgtccagcagaggagtgggcatgctccagcctcgcagc
tcaatcaagcactgccagttgaagtcggagccattgtcgagcactggcttggatccgatt
gggagcaaaagattagaggatgggtcagaaggagatatatctagtcctgcttcagttgga
acacaggacccactacttggattactggatgggcgtgatgacttggagaaggatgatggc
aaacatgagccagaaacagtgtatgaaaccaactgtcactgggaaagctgtactaaggag
ttcgacacgcaggaacatcttgtccatcacataaacaatgagcatattcacggggaaaag
aaggagtttgtgtgtcactggcaggactgttcacgagaactcagaccctttaaggcgcaa
tatatgctggtggtccatatgaggaggcacacgggggagaaaccccacaaatgcacattt
gagggatgtaacaaagcttattcacgacttgagaacctgaagactcacctgaggtcccac
accggcgagaaaccttatgtatgtgagcatgagggctgcaacaaggccttctctaatgcc
tccgacagagccaagcaccaaaatcgaactcactccaatgagaaaccatatgtatgcaag
atccccggctgcaccaagcgctatacagaccctagctctctcaggaaacatgttaaaacc
gtacatgggccggaggcacacattaccaagaagcaccgtggggatgggatgcctaggact
caatctggtcatgagggatctgggaatcatactgttaaaggggaaaatcagctggatatg
gaagcaagctctgctcgcaaggaggatggaagacttgctgttccagatattactttgaag
tcacagcccagccccggtggacagtcatcttgtagcagtgaaaggtcccctttgggaagc
accaacaataatgatagcggggtggaaatgaatgccaacacaggaggaagctttgaagac
ctcaccaacctagatgatattccctctgtagattcaataggcactgcaggtgcttcagcc
ctaagaaagctggagaatcttaggattgacaaactgaaccagctacgtaaagccccatcc
tcaggaaagatggtcaaactgccatctattcacaacagtggccctcagggtgatatgtca
gttgtgtgcggaccactgggtatgtctcacaatcaacatgggatagaactgccatccagc
agtcatgttaatcatcttaatgacaggcggaacagcactacaagcaccatgagctcggcc
tatactgtgagccgcagatcctcagttgtgtctccataccttcccaaccaaagagcaggt
gattctggcaacatggtggattcatatgatatttctacagacccttctggtcattctaat
gaagctgtctgtgctagcgggcttccgggccttactcctgcacagcagtatagattgaag
gcaaaatatgctgcagcaactggtggtcctcctcctactccactacccaacatggagagg
atgaattcaaataataggatggcatttgcttctagtgattatcgtggatcatccatgtct
tccctgctggctaataacattcatagaagacatagtagcaatgagtatcacaactatgga
acaggtattattcacccagctcaagctccaggtgctggaataagaagagctagtgaccct
gcacgaactgggggagatattcaaacagtgccaaaagtgcaacgtttcaaaagtatgaca
aatatgaatgtatctatgatggggagacaagctagtggtattcagcaagcatacggagga
tctgatgctaatttacaaagacatatgttttctccacggcctcccagcattagtgagaat
gtttttatggaaacggctggccctgatggagtatgtcattcaaaggaccacagcattatc
cagcctaatgaaatgcagcactatgtgaactaccagggtcaaggttctcagctggctgca
cccagtgaccatatgaactttaatcaccaaattcatgggatagatggtcaaagccaaaat
gtgtatggtcattctcagcgagctatgagcaacatgcatctaaattcggaaaattactca
agccagagcaatgttccaacacaaacaaatttcaaccagtgccaaatgactggtcagagc
cagcattttcagaacacaaggcaagcgtacagcagttctaatctgcctgtacagtggaat
gaagttagttcagggaccatggacaaccctggtcagagtccaaatcaccaaataatgcat
caaaatatgccaccaggaaatcattgccagagtcaattctcaaactctgtggtcccagaa
acaacaaaacagggttgccctgtaaacagaagttcatgccagcagggaatgtatatgaat
aatcagaaatataaccatgggggtcaggtgcaggttaagcctgaacagcagttccaccat
tcagctcccactatgatgtcctgtcaaaacatgaagcatccttctagacaagagcataat
tttactcagtcaaatacaatgcttttgtcacctgaatccacaaactgtgatttccaaggg
caacaagacaacactcagaactcctgcttcaatgttggccttaacccaaatctactaagc
cctcaagggcgtaggtctcagacacccatgatgcaggtgaaggaaatgatggtcagaaac
tatgtccagtcccaacaagcactaatgtgggagcaacatccaaaaagtatggccatgatg
aacaacagtggagaagatgtggatactgggcaaaaccagcacaagaataccccaaatgca
gctgtgtatatgagtcctaagtatatcaattatcagtgcaagccatcaccaaacaactta
atgagcccaagctcccaggacagccaatcaagtcacaccaaaacaatgggaagcccaagc
agtcagtgttacaactatgacatgttgccccatcctccctgtggccccaaacctttaagc
aggcaacacagtatatcaagtcagtcaacatacatgggaagtccgaatcagcacagtcca
tcttaccagccatctgaaacaagcccaaggagaatggcctgtcttcctccaattcagcct
cagtctgaagtcagcaataacaccagcatgatgtattacacaggtcaaatggaaatgcat
catggtaaagcaggggtccataaacttgctacatcactaaatcaaaaccagacaagctgt
gatggacaacaacacggccagtacagctctaatcatagctttctaaagacagactctgtg
ccatacacaagttcatgtccaggtgccaatacattagacagtcttgatctggagaataca
cagattgattttacagcaattatagatgatgcagataatactttgatgtctggcaatata
agcccgaatggactagcaggaacttctccgggttcctcacacttgaccacactgagaaac
acaggagctgttgttccaaacatggtggtgggtgacttgaactcaatgttaacttctctg
actggagaaaataagtacctaaacacaatctcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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