KEGG   Xenopus tropicalis (tropical clawed frog): 100494908
Entry
100494908         CDS       T01011                                 
Symbol
ap4e1
Name
(RefSeq) AP-4 complex subunit epsilon-1
  KO
K12400  AP-4 complex subunit epsilon-1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04142  Lysosome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    100494908 (ap4e1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100494908 (ap4e1)
Membrane trafficking [BR:xtr04131]
 Endosome - Golgi transport
  Others
   AP-4 complex
    100494908 (ap4e1)
SSDB
Motif
Pfam: Adaptin_N AP4E_app_platf Cnd1 Coatomer_b_Cpla HEAT_2 HEAT_EZ Proteasom_PSMB
Other DBs
NCBI-GeneID: 100494908
NCBI-ProteinID: XP_002936390
Xenbase: XB-GENE-988221
UniProt: A0A6I8RK81 F7AJC0
Position
3:102456409..102480622
AA seq 1112 aa
MSEIVERTLSALPGLILQDSPSGASSKLGNLIRSITALTSRQEEEKLIQQELANLKVTVS
SANTTLRQMKECMVRFIYCEMLGYESGFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHENH
ELLLLLVNTVLKDLQSTNLVEVCMALTVVSQIFPKEMIPAALPLIEDKLQHSKEIVRRKA
VLALYKFYMIAPTQVQHIHEKFRKALCDRDVGVMAASLHIYYQVIKDNPAGYKDLTGSFI
TILKQVVGGKLPADFNYHSVPAPWLQIQLLRILRLLGKDDPRASELIYDVLDESLRRAEI
NHNITYAILFECVQTIYTIYPKADLFEKAAKCIGKFVLSPKINLKYLGLKALTYVIQQDP
NLALQHQMTIIECLDHPDPIIKRETLELLYRITNGQNVTVIVQKMLDYLTQSKDECTIIA
LVGKIADLAEKYAPNNQWFIQTMNVVFSIGGDVIHPDIPNNFLRLLAEGFDDEKEDRQLR
LYAVQSYLALLETKNAHYPQRFLQVISWVLGEYAYLAKHIPVESVMTNLYEVLKQRSVTS
ETKAWIVAAISKLTALSPHCSLVDRIIHEFSTCPDTVMRQHVCELKLLRVEGPLTHKLFP
LNSSCEDFMVDASLSFLDGFVADALSNGAATYIPRHQRQEEKMSREKALNLQPYGLCFSP
SLPSASLTDGHSPSAVSVSSGISGNSGETGQKEDTRLKLDGVKKLWGKDGYLLKKESTSV
TSVKPESMAVPLDSGISQSGDKKLQRTDESLVPFTEEEKEKRQLASTLFVGLGSSAVSLM
GKAEQTPKKFKRKSKIGGNKVMNEESSSLPSHLISDGEGYTPPTSGTHLLNSDSHTSPER
LDALGEGDVSTALFANSNMDIIKPLQSTSPNQGTCSVYHVPSLLPDLAQHPHSPVKESAS
DENLSIYFSKVWKDDNVLLAIIIVNRTSLVFQNISVHFDDSKNCTISSSLHCQLSQVDAL
GVQQCWGCVQMLIPCSAESVSGCISYQSELAEPCQIIFCVDFLLLDFIRPLSISTEEFGI
MWPSHSNELKRKLTVGQQSFTGTLHNLQREINFHIVEIIGDEGLAACQMLPTVPCLLHCH
FSSGLLTLWIRSHSSTLLDCLLRQCQKALEEL
NT seq 3339 nt   +upstreamnt  +downstreamnt
atgagtgagatcgtagaaaggactctcagcgcgctgcctggccttatcctccaggactcg
ccgtccggggccagttccaagctcggaaacctcatccgtagcatcacggctctcacttcc
agacaggaagaagaaaaattaattcagcaggagcttgctaatttgaaagtaaccgtttcc
tctgcaaacacaactctgaggcagatgaaggaatgcatggtgagattcatttactgcgaa
atgctgggatatgagtctggatttggttacattcacgccatcaagttggctcaacaaggg
aatttgcttgaaaaaagagtagggtacctggcagtgtccttattcctgcatgaaaaccat
gaattattgcttttgttggtgaatacagttttaaaggacctacaaagcaccaaccttgtt
gaagtatgcatggcactgacagttgtcagccaaatctttccaaaggaaatgattccagct
gccctgccactgatagaagacaagctgcagcattcaaaagaaatcgtgaggaggaaagct
gttctggcattatataaattctatatgatagcacccactcaagtccagcacatccatgag
aagttcaggaaagcactttgtgaccgggatgttggagtcatggctgcttcactgcacata
tattaccaagtgatcaaggacaacccagctggttacaaagacctgacaggttctttcatt
accattttaaagcaagtggttggagggaaactgcctgcagattttaattaccatagtgtc
ccagcaccatggcttcagattcagctcctgaggattttaagattactgggaaaagatgac
cccagggccagtgagctaatctatgatgtgttggatgaatccttaaggagggcagaaata
aatcacaacatcacctatgcaattttgtttgagtgtgtgcaaaccatttatactatttac
ccgaaagcagatttatttgaaaaggcagcaaaatgtattggaaaatttgtgctgtcccca
aagatcaaccttaagtatttaggtttaaaggcactcacatatgttatccaacaggatcct
aatctggcacttcagcatcagatgacaataattgagtgtttggaccacccagatcccatc
attaaaagagagactctggagctgctgtaccgaatcactaatggccagaacgtgactgtt
attgtacaaaagatgttggactatctgacgcagagtaaagatgaatgtacaataattgcc
ttagttggcaaaatagctgacctagcagaaaaatatgccccgaacaatcagtggtttatt
cagacaatgaatgtagtgttctctattggaggggacgtgatacacccagacatacctaac
aacttccttcgactcctggctgaaggatttgatgatgaaaaggaagataggcagctgagg
ctttatgcagtgcagtcttatcttgccttgctggaaaccaagaatgctcattacccccag
cgcttccttcaggttatcagttgggtacttggagaatatgcctaccttgcaaaacatata
cctgtagaatctgttatgacaaacctttatgaagttctcaaacaaagatcagttacttct
gaaaccaaagcgtggattgttgcagctattagcaaacttacagccctcagtccacactgt
tctttggttgacagaataatccacgagtttagcacttgtccggacacagtaatgaggcag
cacgtgtgcgaattgaaactgctgcgagtggagggccccctaacgcacaaactctttcca
ctcaactccagctgtgaagattttatggtggatgcctcattgtcctttctggatgggttt
gttgcagatgcactcagcaatggtgcagcaacttatattccccgtcatcagcgccaagaa
gagaagatgtctcgtgaaaaagctttgaatctgcaaccatatgggctgtgcttctcgcct
agcttgccttcagccagtctcacggatggacattctccttctgcagtttctgtctcgtca
ggaatctcagggaacagtggtgaaactgggcaaaaagaggatactcgccttaagcttgat
ggtgtgaagaaactttggggtaaagatggctacctattgaaaaaggaaagtacatcagtt
acatcagttaagccagaatctatggctgtccctctggacagtgggatttcacaaagtggt
gacaagaaacttcaaaggactgatgagagtttggtgccctttacagaggaagagaaagag
aagaggcagctagcatctactttatttgttggccttggatccagtgctgtcagcttgatg
ggtaaagcagagcagactccaaaaaagttcaagaggaaatcaaaaataggtggaaataaa
gtgatgaatgaagagtcgtcttcccttcccagccatctcatttctgatggagagggctac
actccgccaacaagtggcacgcacttactgaactcagattcccatacatcacctgagaga
cttgatgctttaggggaaggggatgtgtctactgctttgtttgccaactccaatatggat
ataatcaagcccttgcaaagcacctcacctaaccaaggaacttgcagtgtgtaccatgtg
ccatccctgctgcctgatctggcccagcaccctcattcacctgttaaagagagtgcaagc
gatgagaatttaagtatatactttagcaaagtatggaaagacgacaatgtgctacttgcc
ataatcattgtcaataggacttctttagtatttcagaatattagtgttcattttgatgat
tcaaaaaactgcacaatttcctcaagccttcattgccagctttcccaggttgatgccctt
ggtgtgcagcagtgttggggctgtgtacagatgttgatcccttgttctgcagaatcagtg
tctggctgcatcagttaccagtcagagctggcagagccttgtcagatcatcttttgtgta
gatttccttctgctggattttataagacctttaagtatttcaactgaagaatttggcata
atgtggccttctcactccaatgaactgaaacgcaagcttactgttggccagcaatcattc
acaggaactcttcacaacttacagagggaaattaactttcatattgttgaaattataggt
gacgaggggttagctgcatgccagatgctccccacagtgccctgcctgctgcattgtcac
ttcagttctggacttctgacattatggatcagatcgcattcatccacgttgcttgactgt
ttgctacgtcagtgccaaaaggcattagaagaactgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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