KEGG   Xenopus tropicalis (tropical clawed frog): 100495807
Entry
100495807         CDS       T01011                                 
Symbol
chmp4c
Name
(RefSeq) charged multivesicular body protein 4c
  KO
K24782  charged multivesicular body protein 4C
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04144  Endocytosis
xtr04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100495807 (chmp4c)
  09143 Cell growth and death
   04217 Necroptosis
    100495807 (chmp4c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100495807 (chmp4c)
   03400 DNA repair and recombination proteins [BR:xtr03400]
    100495807 (chmp4c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xtr04147]
    100495807 (chmp4c)
Membrane trafficking [BR:xtr04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    100495807 (chmp4c)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    100495807 (chmp4c)
Exosome [BR:xtr04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100495807 (chmp4c)
  Exosomal proteins of colorectal cancer cells
   100495807 (chmp4c)
SSDB
Motif
Pfam: Snf7 DUF6437 SYF2 eIF-5_eIF-2B ABC_tran_CTD
Other DBs
NCBI-GeneID: 100495807
NCBI-ProteinID: XP_002936670
Xenbase: XB-GENE-954321
UniProt: A0A7D9NKB5
Position
6:124026085..124036000
AA seq 222 aa
MSKITKLFKSSGGSGSSSKNRKGPSAQEALFKLRETEEMLTKKQEYLEKKIELELATAKK
HGTKNKRAALQALKRKKKMEKQLAQIDGTLSTIEFQREALENSHTNTEVLKNMGYAAKAM
KAVHENMDLEKIDNLMQDIHEQQDVAQEISDAISRPAGFCDDFDEDELMAELEELEQEDM
NSQMANVKLPSVPSTKLPSRPASSRKKVEDDDDMQMLAAWAT
NT seq 669 nt   +upstreamnt  +downstreamnt
atgagcaagatcacaaagttattcaagtcctctggtgggtcaggatcttcgtcaaagaac
agaaaaggacccagtgcacaggaggccctctttaaactcagggagacggaggaaatgtta
accaaaaagcaggagtacctggaaaagaagatcgaactggagctggccacagcaaaaaaa
cacggcaccaagaacaaaagagctgccttgcaagcattaaaaagaaagaagaaaatggag
aagcagctggcacaaattgatggaactctttcaactattgaattccaaagagaagccctg
gaaaattcacacaccaacacagaagtgttaaaaaatatgggttacgcagcgaaagctatg
aaagcggtacatgagaacatggatttagaaaagattgataacttaatgcaggacattcat
gagcagcaggatgttgcacaagaaatctctgatgccatttctcggccggctgggttttgt
gatgattttgatgaggatgagttgatggcagaattagaagagctggaacaagaggatatg
aactctcaaatggccaatgttaaattgccaagtgttccttcaacaaaacttccatctcga
ccagcatcttcacgcaagaaggtggaggatgatgatgacatgcagatgctggcggcttgg
gccacttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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