KEGG   Xenopus tropicalis (tropical clawed frog): 100497178
Entry
100497178         CDS       T01011                                 
Symbol
nsmce2
Name
(RefSeq) E3 SUMO-protein ligase NSE2
  KO
K22756  E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xtr04121]
    100497178 (nsmce2)
   03400 DNA repair and recombination proteins [BR:xtr03400]
    100497178 (nsmce2)
Ubiquitin system [BR:xtr04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   100497178 (nsmce2)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     100497178 (nsmce2)
SSDB
Motif
Pfam: zf-Nse zf-RING_UBOX U-box zf-MIZ HalX ZYG-11_interact YfbR-like DUF1948 zf-C3HC4_2 gpW ApoLp-III CTD11 zf-RING_2 zf-C3HC4 UPF0242
Other DBs
NCBI-GeneID: 100497178
NCBI-ProteinID: XP_031759369
Xenbase: XB-GENE-13579717
UniProt: A0A6I8RW27
Position
6:140412797..140540154
AA seq 238 aa
MSGRSAPMISFSSVDNSLSSLKSCQGYLSTGMDITASVALDLLETGCESTEVDALESAML
EYAEMERDLNQYIHAVEETVQKLRREQIEQVPDLLSQVQEKYATIQGKNTDEDLKKNGRF
VQFKDQLREMRKQMGEKEEGEGAFENVDEDIAVMPSQQNFTCPITQMKMTNPVKNKVCGH
TYEKEAIERIIQDKHQRKKRATCPIIGCDHSDMQLSDLGPDTLLKRAIDVQNKQKGHH
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtctggccggtcagcgcctatgatttctttcagctctgtggataactccctgtcatct
ctgaaaagctgtcaggggtacctgagcacaggaatggatatcacggctagtgtggccctc
gacctgctcgagactggatgcgaatccactgaggtagatgccctggaatcagcgatgctg
gaatatgcagagatggagagagatttaaaccagtacatacatgcagtggaagaaactgtg
caaaagttaagacgagagcaaatagaacaagtccccgatctcctgtctcaggtgcaagag
aaatatgctacaatacagggaaaaaacacagatgaagacttgaaaaaaaatggccgattt
gttcagtttaaagatcagcttagagaaatgagaaagcaaatgggagagaaagaggaggga
gaaggagcctttgaaaacgttgatgaagacatagctgtaatgccaagccagcagaacttc
acatgcccaattacacagatgaaaatgacaaacccggtgaaaaacaaagtatgcggtcac
acctatgagaaggaggccatagaaaggataattcaagacaagcaccagaggaagaagagg
gctacgtgtcctataattggctgcgaccactctgacatgcagttatcggatcttgggcca
gacaccctgcttaaaagggccattgacgtccagaacaaacagaaaggccaccattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (30)   

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