KEGG T01011: 100497491

Xenopus tropicalis (tropical clawed frog): 100497491

Entry

100497491         CDS       T01011

Symbol

thsd1

Name

(RefSeq) thrombospondin type-1 domain-containing protein 1

K24433

thrombospondin type-1 domain-containing protein 1

Organism

xtr Xenopus tropicalis (tropical clawed frog)

Brite

KEGG Orthology (KO) [BR:xtr00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:xtr04990]
    100497491 (thsd1)
Domain-containing proteins not elsewhere classified [BR:xtr04990]
Thrombospondin domain-containing proteins
  Other thrombospondin domain-containing proteins
   100497491 (thsd1)

SSDB

Motif

Pfam:

TSP_1 TSP1_spondin TSP1_ADAMTS AJAP1_PANP_C TSP1_CCN APP1_cat

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Xenbase:

UniProt:

Position

2:150136800..150147039

AA seq 848 aa
MKHTQNGLTCVLLIILYRFVFSEPGYLIVRESHHVALSREPVFVEYYLPGNNNNTTTYNI
SITLFDISNNRTVTSKDLSVNLSRGSLEFECFHFIAAGLYQFQIVFTEKNQSNIDWRSSI
LNVTWPRFHIDLNRTSNIRSFQIGVFSNEQFCLTFPDKHPRVLLEVEHTHSFQELEGLSS
DRFMLYKTYKEIPLSPSQWVEFECASVRPETFITVSLKPTFSESLIAFMGPVDLVKTFRY
KLVTSAEQRCDASVNVNVIPPPCNYADGKVIVYKEVLRGSAETSTTLAENVLQTGDKVAQ
FNCTLFDIGRNKYCFEFFIASGKIYSFLGAKECVGIRREIESWGLWQSWSPCSVTCGDGE
RERFRECLTTSSEKPACRGRAKETSLCSLEECTSISVKPSSKSTTHSKDTKTSNTVTIAG
ISLCLTIIIITIVITVWRKFHKTQKCSSTVKHNSTHSGNGRKNSDEENIYQMRESFSDMG
EGLHENVEDTVDIPLTYRQSMRVAEEKSGQENDNLQSNVQKLIPPIFSYRLAQQQLKEMK
QRGLTEATKLYHVSQNPMSDTVVDGALAPPSVTDNCDDNIANKFRLQSPFIEQRNLHPQC
HGERSTPLSPYQSTSPCQTLPHLSQFMNQDPKVRYIERPYHKNINFRRTSSFHETKHNKP
FRERSLSTLSPRQTMAYNPRTRTWQYATTDRSKHRSIRAEKSPEHFAKSANFTADPVDFS
SKNLYMWSSESKHDLISSRHAAAKASKLERLEQNRVKKGSSPIDKSWNRVQDYSPTFKDS
YERNSPFSPAQNRREKCQSFPWAADYSFYDNSSFRLTEAEQQMIDLPGYFASNEEDETST
LSMERLVI

NT seq 2547 nt +upstreamnt +downstreamnt
atgaaacacacacagaatggccttacctgcgtattgctgatcattctctacagatttgtt
tttagtgaacctggctatctcatcgtgcgagagtctcatcacgtagccttgagcagagaa
cctgtatttgtggaatattatctcccaggcaataacaataatacaacaacatataacata
tccataactttgtttgatataagcaataatcggacggtaacaagcaaagacctttctgtt
aacctatcacggggcagtttagaatttgagtgtttccattttattgccgctggactttat
cagttccagatcgtttttaccgagaagaatcagagcaacattgactggcggagcagcata
ttgaatgtcacttggccccggtttcacattgatttgaacaggacgtcaaatataaggtcg
tttcaaattggagttttctctaatgagcagttttgtctcacttttccagacaagcaccct
agggttttattggaggttgaacatacgcacagttttcaagaactggaaggactaagcagt
gacaggttcatgttgtacaaaacctacaaggaaatccctttgtctccatcccagtgggtg
gaatttgaatgtgcatcagtacgacccgaaactttcatcacggtctcccttaaacccacg
ttttcggaatcactcattgcattcatgggccctgttgacctagtgaaaacgttcaggtat
aagctagtgacctcagcagaacagaggtgcgacgcatcagtaaatgtaaatgtgatccct
cccccatgtaattacgcagatgggaaggtaattgtgtacaaggaagtgctgcggggttca
gctgaaactagcaccactctggcagagaatgttctacaaacaggagacaaggttgctcag
ttcaactgcactttatttgatattggaaggaacaagtactgttttgagttcttcattgct
tctggcaagatttactcatttcttggagccaaagaatgtgtggggataagaagagaaata
gagtcatggggtctgtggcagtcgtggagtccatgcagcgtcacatgcggagatggcgag
agagagagatttagggaatgcctgacaacctcatctgaaaagcctgcctgcaggggacgg
gcaaaggagacctcactctgctccctagaggaatgcacaagtatatctgtgaaaccttca
agcaagtcaactacacattctaaggacactaaaacaagcaatactgtgaccattgctggt
atttctctgtgcctgacgattatcatcattaccattgtaattactgtatggaggaaattt
cacaagactcagaagtgcagctcaacagtgaaacacaactctacccattcaggcaatggg
cgcaagaattcagatgaagaaaatatttaccagatgagggaaagcttctctgacatgggg
gaaggtctccatgagaatgtagaggacacagtcgatattcctttgacatacaggcaaagt
atgcgagttgcagaagagaaaagtggacaggaaaacgataacttgcaatcaaacgtgcag
aaattaatccctccaatttttagctaccgccttgctcagcagcaactaaaggagatgaaa
caaaggggtttaactgaagccaccaagttgtaccatgtttctcagaatccaatgtcagat
acagttgtagatggtgccctggctcctccatcggtcacagacaattgcgatgataacatt
gccaacaaattccggcttcagtctccatttatagagcagaggaatttgcaccctcagtgt
catggagaaagatcaactcctttatccccttatcaaagcacaagcccatgccagacatta
ccccatttatcccaatttatgaatcaagaccctaaggtcagatacattgaaaggccatat
cacaaaaatatcaactttaggagaacctccagtttccatgaaacaaagcacaacaaacct
ttcagagaaagaagtctatcgacactttccccaaggcaaacaatggcatataatccaagg
accagaacttggcagtatgcgacaactgataggtctaagcatagatctataagagctgaa
aaaagtcctgaacattttgcaaaaagtgctaattttacagctgacccagttgacttttcc
tctaaaaacctgtacatgtggtcaagtgaaagcaaacatgacttaatcagtagccgccat
gctgccgcaaaagcatcaaagctcgagagactagaacaaaaccgagttaagaaaggatcc
tccccaattgataaatcatggaatagagtgcaggattactctccaacatttaaagacagt
tatgagaggaacagtcctttcagtcctgctcaaaacagaagagaaaagtgtcaaagtttc
ccttgggcagcagactattctttctatgacaattcatcattcagactcactgaagcagag
cagcagatgattgacctgcctgggtattttgcctccaatgaagaggatgaaaccagtaca
ttaagtatggaaagactagttatttga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

Download RDF

DBGET integrated database retrieval system