KEGG   Xenopus tropicalis (tropical clawed frog): 100497601
Entry
100497601         CDS       T01011                                 
Symbol
knl1
Name
(RefSeq) protein CASC5
  KO
K11542  protein CASC5
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    100497601 (knl1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xtr01009]
    100497601 (knl1)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xtr03036]
    100497601 (knl1)
Protein phosphatases and associated proteins [BR:xtr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100497601 (knl1)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Kinetochore proteins
    KMN network proteins
     100497601 (knl1)
SSDB
Motif
Pfam: MELT Knl1_RWD_C Spc7 DUF1664
Other DBs
NCBI-GeneID: 100497601
NCBI-ProteinID: NP_001265688
Xenbase: XB-GENE-6052258
UniProt: F8UGT8
Position
8:114988633..115024833
AA seq 2794 aa
MDGNPWLQGNSDVTERSLRRRLSSILKVPRSPLKDLGNGNVLHQDSTIEKRRKSRRVSFA
ENIRVFAPESQEAADNNGQVSGKSVNEENEATVESSCQITGMDTLLHGPIQTPAPQSEWD
CADHEKTVFFSCDNDMEMTASNTIHIDAFLEEKINKIDVTSFLASLKSQDDDSCQNVKLN
PSTSSDFPSAAESAVPTKINFKDFLTGLKTEKQTIYPFRGCDKENFFPFSIASENSGSEL
FSTFTQRQEDKENLTQIFTEQDEGLDMTKCHTTNITAFVPVTKQEFPFHFEPNALNIPKA
FLSHEHLQDGFKLNKPESVSKNQTVLFEDDMDMTQSHSICLENVLSKPKSGGNAQSLNNF
SDKTVVFTDSNEMEFTQNHTVAINTNTGAGDSVWQKSNLLITERNFVSSDDSMDLTKCHT
VAIDGKSMESSCAPTSTSLPATVEWHNGISGSTSSSTYFSKSLPKQNQDLSLPFYLGAEK
TVTFDDEDMDLNTTNTAHIMFGLGPNTSIRRKSIPVVPTSHLFIMNDKTVVSNQDMDLTQ
CVTTVLDTDSCYGLQGSNEACSSSSSEPKKSLIVSKSGVLPKPTNSSDQHKSSHFKEDQY
TNDIISSDGSSKSMLSAVADKTLLFSCNQDDMEITKSHTVAIDKFLQEHNSTKIPENVPK
DKTVKPGGLRLSSFSKHILFPEASHDVELTKGHPADEKLGQKEKELCQPSSDHQQNAPIF
SKNETVEDMLMGGMNTNFKSIVGTFPSVHNKTILAMENMDITEISKSAFKDTFLGGKFPV
DEVKTSIAARDKTILFSCEQEDMDMTRSHTVTIERKDLCKGSKHDLNLHMTNNVSTFSSE
LDFTKSHGAIENKVSVADECSKLVSNRKSTGKAMISDCVQNTGLYLQSVNRNVPLSRFSE
EQTAFSPSKDYMDFTQSCTVAIENNLPEGLKTAKTTSQEFDFYQSKSTASDKTVEDDMEL
TKSHTMVISAKCADELHSQFAAFKSNTDAGFGEDDMDITKSNTVFINEIPDISKGLAKPY
FLKRESVAGPKSSFLANEKTIHIEGDMEMTTGNIGLLLHDAVVPTRVNKAEVDKTVVFLC
EQDNMDLTLSHTVAIESKGLCELNSDVRNKSGHFSKQNPLPLNKTVHMVEDDMELTRSHT
MVINEQPDGLYNQSNPANKSNYDDMGITKSDTVFINETKTSKEQVDPSLLKKINANKNSE
LRRSYFSDKSIHLVGDMEMTDANAGLLINDTQVPVQRKSIGLPYDKTLVFSCETEHMDLT
MSHTVAIESKGIYEAAEALNPNGKSKSDNCSELPSVSMNKNTVLLEDDMELTKSLTMVIK
KSDPSNYTLKSNYGPGFEQDDMDITRSATVFIDNMPVDQQSKGQINLFVKRQSVGLKGSN
FVYDRTVHLDGNMELTNAGTGLLISETNVPTAKNTLEACNDKTMVFSNEQDNMDLTVSNT
VAIENKDFCEGTKTPNIRISENHARYPSVPVNKTCTMFAEDMEMTKSHSMVIEQKTALLD
VHNQCAVKQSFVNLVSEADAMDITKSNTVFIDNHLDGFGKTPLNSRKQDFSNEHLHGDMK
ARMNGKTGRLSSANVMSHIAAAENKEMGNSDLHTDRLQNYVDTCSAPACKTIVFSRVEDD
MDLTKSHTMVIDERNILKGENQSSRQQGQIFTANSDKTVAFSSDDMDFTLSHSARLEKGI
FELAQQEEMINILSKTQKGNILELQRPFLNKHATVNFPMHEGDVELAKCHAVDVEVDKQT
PSTALIKQDMETETSKASSMKSLEKGVMSDANMNLGNITSCALTKYSVGEDKTAISVCNL
SEMDMTTSHTVAIENKMEDLQNPVISSSSQKVVVPGMGEKNSNGMVFCAAAYTSTHMDQC
TLDGKNKQQNNQVVAGNQSDFGCDTNIYGGVSSLKPADHITHACGNNEGPVSKDETGIPY
KDTVDDKTMKKARPKSKRVSFMLPEPQAGSCVPKASVLEDANKPAAEKNLDECNLKQSSL
GNNAEQEGETVKSMAAEQNIRSRDEDNLEQEDHDTLSIERPVLKSSNLVEYSEADKMRRR
SIADIQSKIKSLTKSSKSFPDSQTAPVSHLVGHLSLSSQAPTESSANKTEQAGTELSDKL
SIDAKPNLYPKGDDVASYDNGETTLKETSLPNKLSVKVFHPKLPQKPNPIKCNVQESSSS
SEAHVKPERSSLTLLKALTNCNTSQCIDEEFLPLSPDEKGQDGMFHYEVPEGAWEELFEK
EALHCSLEQDIYIPESQDGINEKKRNREPEENIEFQKEKRGRTEDILNSDKSKPSVTITS
PDDYHISEFSSLHLTKTIEQTNCSSNSSQDSRVDGMPMELSSSQQCSQMESQLPWDTGCE
QSLWGKFQDGTITVKEFFMLLRIRILIQKPRYSELPANYRAKEAVTAEDLLLDKYIYQPK
LQVYEEECHALGQIIQELKTFAEMQEKPLMQVNSLLWEAMKMCSEDEVIYFGVKLKSLKS
SYSKKSKVLAHERKVAVYSKLLHVAQTRCEQLQSRMDEVDRFLEETDNCISELEREMDKL
DEDIRNGELINMDPTVRGLQTELEKLQTEEANGIRGCLQLEERKEKVLTQLGCLQEEASK
LDKQLEEFNFTEWDLDNWAENQAVFTFLYDSIELCIKFEDVVDGKHFVNNPCRRLSMVTF
ESQLNEEAAPPSSLLVHRLIMQFIEKNGCFHEKYKTQQDLPRLLFDLSLATSRCRLLGEE
VEYLMKWGAKYNILKIQVESTEVKLLFSSSLAYAKFELIINLSESYPTLPLTFTFRNHIG
NIGHSNISAVLSKVPVGLWYLKRAVRHIHQHLLV
NT seq 8385 nt   +upstreamnt  +downstreamnt
atggatggcaatccttggctacaaggtaatagcgatgtgacagagcgcagcctcaggagg
cgactttcctctattttaaaagttccacggagtcctctaaaggatcttggaaatggaaat
gttcttcatcaggattcaaccattgaaaagcggagaaaaagtcgtcgagttagctttgct
gagaatataagggtttttgcaccagaatcccaagaagctgctgataacaatgggcaagtt
tcagggaagtcagtgaatgaggaaaatgaagctacggtggaatctagctgccagatcact
ggaatggatacactgcttcatggccctatacaaaccccagctccccaatctgagtgggac
tgtgctgatcatgagaagaccgtattcttttcctgtgataatgatatggaaatgaccgct
agtaacaccatacacattgatgctttcctggaggaaaaaataaacaaaattgatgttact
tcatttttagcaagtttaaaatcccaggatgatgactcctgccagaacgtcaagctaaac
ccttcaacaagcagcgattttccttcagcagcagaatctgcagtcccgacaaagataaat
tttaaggactttttgactggtttgaagactgaaaaacagaccatttatccttttagggga
tgtgacaaagaaaactttttcccctttagcattgccagtgaaaactctggcagtgaatta
ttttctacatttactcaaaggcaagaagataaagaaaatctcactcagatatttactgaa
caagatgaaggacttgatatgacaaaatgccacacaacaaatattactgcttttgttcca
gtgacaaaacaggaatttccatttcattttgaacctaacgccctaaacattcctaaagct
tttttaagtcatgaacatttgcaagatggttttaaattaaataaaccagaatctgtatcc
aaaaatcaaacagtcctttttgaagatgacatggatatgacacaaagccatagcatttgc
ttagaaaatgtactgagcaaacccaaaagtggtgggaatgctcagtcactgaataacttt
tctgataagactgttgtttttactgattctaacgaaatggagtttacacagaatcatact
gttgcaataaacaccaatactggagcaggggactcggtttggcaaaaatcaaaccttttg
attactgaacgtaattttgtttcttcagatgacagcatggatctcacaaaatgccacaca
gtagctatcgatgggaaaagtatggagagctcatgtgctcctacatcnacctctttgcca
gccacagtggaatggcataatggcatctctggttcaactagtagttcaacttatttcagt
aagtcattaccaaagcaaaaccaagacctttccttgcctttttatttgggagctgaaaaa
accgtgacatttgatgatgaagatatggatttgaacactaccaatacagctcatattatg
tttggattgggcccaaatacttctatccgcagaaaatctatacctgttgtgccaactagc
catctctttattatgaatgataagacagttgtctcaaaccaagatatggacctcacgcag
tgtgtaactactgtgcttgacactgactcttgctatggattgcaaggttcaaatgaagct
tgtagcagctccagttcagaaccaaaaaagtctttgattgtgagtaagtcaggtgtcttg
cctaaaccaaccaattcatctgaccagcataagtcatctcactttaaagaagatcaatat
actaatgacataatctcctcagatggcagttctaaaagtatgctttctgctgtagctgat
aaaacactcttgttctcatgcaaccaggatgatatggagattacaaaatcacacactgtt
gctatagataagtttttgcaagagcataactctactaaaataccagaaaatgttcctaag
gataaaacagtgaaacctggaggtttaaggttatcttcattttccaaacatattttattt
ccagaggccagtcatgatgtggaacttactaaaggccaccctgctgatgaaaagctcggg
caaaaagaaaaggaactttgccagccatcctcagatcaccagcaaaatgcacctattttc
agtaaaaatgaaacagtggaagatatgttgatgggtggcatgaacacaaactttaaaagc
atagttggtacatttccttctgttcacaataagaccatactagccatggaaaatatggac
atcacagagattagtaaaagtgctttcaaggacacatttctagggggcaaatttccagtt
gatgaggtgaaaactagtattgctgctcgagataagaccattttgttttcatgtgaacag
gaggatatggatatgacaaggtcacatacagttactattgaaaggaaagacttgtgcaaa
ggttctaaacatgacctaaatttgcatatgaccaacaatgtttctacattttcttctgaa
ctagactttacaaagtcacatggtgctatcgagaacaaagtctcggtggctgatgaatgt
tcaaagctggttagtaataggaaaagcacaggcaaggctatgatttcagattgtgtgcaa
aacactggactatatttacagtcggtaaataggaatgttcccctatcaagattttctgaa
gaacagactgcgttttcacccagtaaggactacatggattttacacagtcctgcacagta
gctattgaaaataatttgcctgaaggacttaaaactgctaaaactacttcacaagaattt
gatttttatcagtcaaaatccactgcatcagacaagactgttgaagatgacatggaactt
accaaaagccacactatggttattagtgcaaaatgtgcagatgagcttcacagccaattc
gcagcattcaaaagtaatactgatgctggttttggagaggatgatatggacatcaccaag
tcaaatacagtatttatcaatgaaattcctgatatttccaaggggctagcaaaaccttat
tttctaaaacgggaaagtgtagctgggccaaagagctcattccttgctaatgaaaagacc
atacacatagagggtgacatggaaatgactactggcaacattggactgttactacatgat
gcagttgtaccaacaagagtaaataaggcagaggtagataaaactgtggtatttttatgt
gagcaagataacatggatttaaccttgtcacatactgtagcaattgaaagcaaaggcctc
tgtgaacttaattcagatgtgagaaataaatctggccatttttctaagcaaaacccattg
cctctgaataaaacggtccacatggtggaagatgatatggaactgaccagaagccacact
atggtcattaatgaacaaccagatgggctctacaaccagtcaaatcctgcaaataaaagt
aattatgatgacatgggcattacaaagtcagatacagtgtttatcaatgaaactaaaacg
agtaaagagcaagtagacccttctcttttgaaaaaaataaatgctaataaaaattctgaa
ttaagaagatcttacttttctgataagtcaatccatttagtgggtgatatggaaatgaca
gatgcaaatgctggactgcttattaatgacacacaagtcccagtacaaagaaaatccata
gggctcccttatgataagactctggtgttttcttgtgagacagaacacatggacttaacc
atgtcacatactgtagccattgaaagcaaaggcatttatgaggcagcagaagcgctcaat
ccaaatgggaaaagtaaatctgacaattgctccgaactcccctccgtatctatgaataaa
aatactgtcctattagaagatgacatggaacttacaaaaagcctgacaatggtcattaaa
aagagtgacccatcaaattatactctcaaaagcaattatggtcctggttttgaacaagat
gacatggacattacaaggtcagctactgtatttattgataatatgcctgtagatcaacaa
tcaaaagggcagataaatctttttgtgaaaagacagagtgttggtttaaagggatctaac
tttgtttatgatcgaactgtgcatttggatggtaacatggagttgacaaatgctggtact
ggactgttaatcagtgaaacgaatgtaccaactgcaaaaaacaccttggaagcatgcaat
gataagacaatggtgttttcaaacgagcaagataacatggacttaacagtgtcaaatact
gtggcaattgaaaataaagacttttgtgaaggtaccaaaactcctaacataagaatatct
gaaaatcacgcgaggtacccatcagtgcctgtaaataaaacttgtactatgtttgcagaa
gatatggaaatgacaaaaagccactcaatggttattgaacagaaaaccgcattgctagat
gtgcataatcaatgtgctgtcaaacaaagctttgtcaatctagtatctgaagcagatgcc
atggatattacaaagtcaaatacagtttttattgacaatcacttggatggctttggtaaa
actccactcaactcaaggaaacaagatttctctaatgagcatttacatggtgacatgaag
gcaagaatgaatgggaaaaccggaaggttgtctagtgctaatgttatgtcccacattgct
gcagctgaaaataaggaaatgggtaattcagacttgcacacagaccgacttcaaaattat
gttgatacctgttccgctcctgcatgtaaaactatcgttttttctagagtagaagatgac
atggatcttactaaaagccacaccatggttattgatgagagaaacattttaaaaggagaa
aatcagtcttccagacaacaaggtcaaatatttacagcaaatagtgacaaaactgttgct
ttttctagtgatgacatggactttacactgtctcactctgcaagactagaaaaaggcata
tttgagttagcccagcaggaggaaatgattaatatcctttctaagacccaaaagggcaac
attttagagttacagaggccctttcttaacaagcatgcaactgttaattttcccatgcat
gaaggtgatgtggaactagcaaaatgccatgccgtggatgttgaagtggacaaacaaacc
ccttctactgctttaattaaacaagatatggagaccgaaaccagtaaggcaagtagcatg
aagtcccttgaaaaaggtgtaatgtctgatgccaacatgaatttgggcaacataacatca
tgtgcattgaccaaatacagtgtaggggaagataaaaccgcaatatctgtgtgtaacctc
agtgagatggatatgactacatctcacacagttgcaatcgagaacaaaatggaagatcta
caaaacccagtgatatcctccagcagccagaaagttgttgttccaggtatgggtgaaaaa
aactcaaatggaatggttttctgtgcagctgcatatacctctactcacatggatcagtgt
actttagatgggaaaaataaacagcagaataatcaagttgttgctggaaatcagtcagac
ttcggttgtgacactaatatatatggtggtgtctcttctttgaaaccagcagaccatatt
acacatgcatgtggaaataacgaaggtcctgtttcgaaagacgaaaccggcatcccatac
aaagatacagtagacgataaaaccatgaaaaaagcaaggccaaaatcaaagagggtatct
ttcatgctaccagaacctcaagcaggctcttgtgttcccaaggctagtgttttagaggat
gcaaataaacctgctgctgaaaaaaacttagatgagtgtaacctgaagcaaagttctctg
ggcaataatgctgagcaagaaggtgagacggtaaagtccatggcagcagagcaaaatatc
cgttcaagggatgaagacaatttggaacaggaagaccatgacactttatcaatcgaaaga
ccagtgctcaagtccagtaacttagtggagtactcagaagcagataaaatgagacgtaga
agcattgccgatattcagtcaaagataaaaagtttaaccaagagctctaaatcctttcca
gattctcagactgctccagtctctcaccttgtaggacatctctccctttcatcacaggca
cctactgaaagttcagccaataaaactgaacaggcaggtacagaattatccgacaaactg
tccattgatgcgaaaccaaacctgtatcctaaaggtgatgatgttgcctcttatgataat
ggggagacaactctgaaagaaacaagtttgccaaacaagctttcagttaaagtttttcat
cctaagttaccccaaaaaccaaatcctattaaatgcaacgtacaagagtcctcttcttcc
tctgaagcacatgtaaaaccagagcgaagctccttgactctactcaaagcactgaccaat
tgcaatacatcccagtgtatagatgaagaatttcttcctcttagcccagatgagaaaggc
caagatgggatgtttcattatgaggtaccagaaggagcttgggaggagttgtttgaaaaa
gaggctctccattgcagtctggaacaggatatatatatacctgaatctcaagatggcata
aatgagaaaaagcggaaccgtgaacctgaagaaaacattgagtttcaaaaggagaagcgt
ggccgaactgaagacatactgaacagcgataaatccaagccttcggtgactatcactagc
cctgatgactatcatataagtgagttttcatctctccatttgacaaaaaccatagagcag
accaattgcagcagtaacagctctcaggactcccgagtagatggaatgcccatggagctg
agcagtagccagcagtgcagtcagatggagtcacagttgccctgggatactgggtgtgaa
caaagcctttgggggaaattccaagatggtaccatcactgtaaaggagttttttatgctg
cttaggattcgaattcttattcagaaaccacggtacagcgagcttcctgcaaattacaga
gcaaaagaagctgtaacggcagaagatctcctgttggacaagtacatatatcaacctaaa
ctccaagtatatgaagaagaatgccatgctctgggccagatcatacaggaactgaagaca
tttgcagagatgcaagaaaaaccattgatgcaagtaaacagcctcctatgggaagccatg
aaaatgtgctcagaagatgaggtgatctattttggagtaaaactaaagagtctgaagtca
tcttattctaagaaaagtaaagtattggctcatgagaggaaagtggctgtgtacagcaag
ctgcttcatgtagcccagactcggtgtgagcagctgcagtcgagaatggatgaagtggat
aggtttcttgaagagacagataattgcatctctgaactggaaagggaaatggacaaactg
gatgaagacatcagaaatggggagctgataaatatggatcctaccgtgagagggctgcag
acagaactagaaaaactgcagacagaagaagcaaatggcataagaggatgcttacaactt
gaagagaggaaggagaaggttttaacacaacttggctgcctgcaggaggaggcgagtaag
ctggacaagcagttggaagaattcaactttacagaatgggatttggataactgggcagag
aatcaggccgtttttactttcctctatgactccattgaactttgcataaagtttgaagat
gttgttgatggtaaacattttgttaacaatccctgtcggcgattgtccatggtgactttt
gaatcacagctgaatgaggaagcagcccctccatcgtctcttctggtacacagattaata
atgcagttcattgagaaaaatggatgttttcatgagaagtataagacacagcaagatctg
ccacggctgttatttgacctgtctctggccaccagtagatgccgcttacttggagaagag
gttgaatatctgatgaaatggggagccaagtataatatcctcaagatacaagttgagagc
acagaggtaaaactcctattttcaagctctttagcttatgcaaaatttgagctgataata
aatctctctgaatcctatccaacactccctctcacgttcacatttcggaatcacattggg
aatataggccatagcaatatttctgccgttctatcaaaagttcctgttggtctgtggtac
ctgaagagagcagtgcgtcatatccatcagcatcttcttgtgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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