KEGG   Xenopus tropicalis (tropical clawed frog): 100497817
Entry
100497817         CDS       T01011                                 
Symbol
gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2
  KO
K15200  general transcription factor 3C polypeptide 2
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xtr03021]
    100497817 (gtf3c2)
Transcription machinery [BR:xtr03021]
 Eukaryotic type
  RNA polymerase III system
   Basal transcription factors
    TFIIIC
     100497817 (gtf3c2)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 MIOS_WD40 DTHCT
Other DBs
NCBI-GeneID: 100497817
NCBI-ProteinID: XP_031757794
Xenbase: XB-GENE-997570
UniProt: F6X5H4
Position
5:161805021..161828583
AA seq 931 aa
MDPPASGTTETAAEGTMVLRVEESDGQAHAVPVAPGARSPGKQEPVNYLGHTPVKCCMVG
STGNTGAPPGDCRNNLSLSDSPVCVREEPSTQASLGCSAQAKRLNDPLSSPALPASVPEP
MSPTLPCLHENGPPTGSQLTPLVKVPKKRGRKSKAELLLIRQAQALDAEALARQSLALRQ
ESDNQDMETTPSGRPRRRAAKTALMYLHDLADELSSSGLSSPTKPSAVSDGSSDERGKSR
RRKRKAEGSEEDSDYVVSEDVLKEAEFEEEDNESLSGAYEPELSTFRRKAFSTPGERSGP
QIRGFADNGFHNSIMVPVWKASHVTAEYRDTCYSDWEFPDWIPSTENWHFLTHREAEPYL
PAQRLSPPFTIRREGIKEEAKPCTLGRFQSLPPHPQRWDMNFFVGGPVWSLEWCPTLGGS
GSCQYLALYCHWGMDDRHKVDGVHPGPALLQLWSLGPLDMENSCDSGPVFSYGIAVDHGC
IWDMKFCPSGGWELPCTSRKSLQMARLGLLAAAFSSGHIEIYSLPHPESLYSHRKSQVKA
QDLWEHTVCKVDCVVRLQVGSIKACTPGESGQCFTLAWHPAKPHQYLAAGFYDGTVSIWD
LKTKSVLQRVRQGRVIKQYPFLSFLSHDHAVRSVEWCKADGNFLVTSGNDRRLKFWDLRR
LPEPINNMKRFQSTELSWLLPYSGVAVAQDNCYASHGLCGIHYVDSGFLGYKPYFVTPRK
GTVWSVSGSDWLSSIAAGDVTGEVIVIVLPNLNVTSVNTKRPADRRFPVYKADFLPHVSP
ESTQPGTELPAGPLAESSEWGHLKPKSFRAAAGRFGLLFQDMDMRDFKRLLSREPVKRMH
ANENKGDLNMERVQIEAVHKVRFSPNLDTHAWVASGGHSGLVRIHCIQGLMTSVGQKLIQ
EKSSQFRAMFQSEPIRECDFNPEVQHCVVQV
NT seq 2796 nt   +upstreamnt  +downstreamnt
atggacccccctgcgtcgggtactacagagacagcagctgaaggcaccatggttctgcgg
gtagaagagtctgatgggcaggcccatgccgtaccagtggccccgggtgccaggagccca
ggcaagcaggagccagtgaattatctgggccacaccccagtaaagtgctgtatggtgggc
tctacagggaatacaggggccccacctggagactgccgcaacaacctgtccctctctgat
tcgccagtttgtgtgagggaggagccaagcacgcaggcctctcttggttgctccgcacag
gccaaacgcctcaatgaccccctttcatcccctgctttgcccgcctctgtgcccgaacca
atgtccccaacgctgccctgcctacatgagaacggacctcccacgggcagccagctcacc
cccctggtgaaggtacccaagaagagagggcgcaaatccaaggctgagcttctgctgatt
agacaggcgcaagcactggacgctgaggcccttgcaaggcagtctctggcattaaggcag
gaaagtgacaaccaggacatggagaccacccccagcgggcgcccccgaaggcgtgcagca
aaaacagccttgatgtacctgcatgatctggcagatgagctctcctcgtcaggcctgtct
tctcccaccaaaccctcggctgtgtcggacgggagctcagatgaacgggggaagagcagg
cgccgaaaaaggaaagccgaggggtccgaagaggattcagattatgtggtatcggaggat
gttcttaaagaagcggagttcgaggaagaggataatgagagtctgagtggggcctatgag
cctgagctgtctactttccgaaggaaagctttctctacgcctggggagaggagtggcccc
cagatacgaggattcgccgacaatggattccacaattccatcatggttcctgtctggaaa
gcctctcatgttacagcagaatacagggacacgtgctactcagactgggagtttcctgac
tggatcccaagcacagagaactggcacttccttactcacagggaagcagaaccgtacctc
ccagcgcagcgcctctccccacccttcaccatccggagggaaggaataaaggaggaggcc
aagccctgcaccctcggcaggttccaatctctcccgccccaccctcagcgctgggacatg
aatttctttgtggggggtcctgtgtggtcgttggaatggtgtccgacactgggtgggtct
ggatcctgccaatacctggcgctgtactgccactggggtatggatgatcggcacaaagtg
gacggtgtacatccggggccggccctgctgcagctctggagcttggggccactggatatg
gaaaacagctgcgactctgggcctgtgttctcttatggcatagctgtggaccatggctgc
atctgggatatgaaattctgccccagtggaggttgggagttgccctgtacctcccggaag
agtttacagatggcacgcttgggacttctggctgctgccttctccagtggccacatagag
atttacagtctccctcacccagagtccttgtactcgcaccggaagtcccaggtaaaagct
caggatctgtgggagcacacggtgtgcaaggtagactgtgtggtgcggctgcaggtgggc
tccatcaaggcctgtaccccaggagagagcgggcagtgcttcaccttggcctggcaccca
gccaaacctcaccagtacctggccgcgggattctatgatggcaccgtctccatctgggac
ctgaagaccaagtcggtgctgcagagagtgcgccaaggccgggtcatcaagcagtaccct
ttcctcagcttcctgtcacatgatcatgctgtgcgcagcgtcgagtggtgcaaagccgac
ggtaatttcctggtgaccagcgggaacgaccggcggctgaagttctgggacctgcggcgc
ctgcctgagccaatcaataacatgaagcggttccagagcacggagctcagctggctgctg
ccctactccggggtggcggtggcgcaggacaattgctacgcctcgcacggactctgtggg
atccactacgtggactcgggtttcctggggtacaagccctactttgtgacgccacggaaa
ggaaccgtttggagtgtctcaggttctgattggctgagctctattgctgctggggatgtt
actggcgaagtgattgtcattgtgctgcccaacctgaacgtgacgtccgtcaacaccaag
cggccggccgacaggagatttcctgtctataaagcagatttcctgccccatgtgtcccca
gaatccacacagcctggcacagagctgcccgccgggcccctggcagagagcagcgaatgg
gggcatctcaagccaaagtcattccgtgccgctgccggcaggtttggccttctgttccag
gacatggatatgagggactttaagcgcctgctgagccgggagccagtgaagaggatgcac
gccaatgagaataagggggatctgaacatggagcgcgtgcagatagaggcggtgcacaag
gtgcgtttcagcccaaacctggacacacacgcctgggtggcatctgggggccactctggg
ctggtgcggatccactgtatccagggcctcatgacttccgtggggcagaagctgatccag
gagaagagctcccagttccgagcaatgttccagagtgagccaatcagggagtgcgatttc
aacccagaggtgcagcactgtgtggtgcaggtgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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