KEGG   Xenopus tropicalis (tropical clawed frog): 100498148
Entry
100498148         CDS       T01011                                 
Symbol
aqr
Name
(RefSeq) RNA helicase aquarius
  KO
K12874  intron-binding protein aquarius
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100498148 (aqr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    100498148 (aqr)
Spliceosome [BR:xtr03041]
 Complex B
  Other components
   Prp19-related factors
    100498148 (aqr)
 Complex C
    100498148 (aqr)
SSDB
Motif
Pfam: Aquarius_N_1st Aquarius_N_2nd AAA_11 AAA_12 Aquarius_N_3rd AAA_19 ResIII AAA_30 DEAD UvrD_C_2 SLFN-g3_helicase UvrD-helicase AAA Parvo_NS1 AAA_16 PhoH AAA_22 nSTAND3
Other DBs
NCBI-GeneID: 100498148
NCBI-ProteinID: XP_002932889
Xenbase: XB-GENE-1217636
UniProt: A0A6I8RYN8
Position
8:111654211..111691845
AA seq 1564 aa
MGKGLPAHSLLANTYWAPHSKKKLPFDYKVIEDIYVKEIAASRFSIKKIMLLEFSQYLEN
YLWVNYSPEVSSKPYLMSICCMVNEKFRENVPAWETFKKKPEHFPFFFKSIMEASITVET
ENDFSLHELTVLLVFLDHCFNSLEVDLIRGQIQQLISLPMWICLQPSRLEKELKKTPKLR
KFWNLIKKADEKMDSKACAQAMQERTFLKQLIQNFLSVLQSIPTSGTVSMDRVHYCERFI
ELMIDLEALLPTRRWFNTVLDDSHLVVHCYLSNLFQREQEGHLFSQLLDMLKFYAGFEIN
DQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYNFALSNVAAVDLRESLVKLFGPLNP
NTLHGVASYLCLLPALAEGEDTKYEKELLLELLVSRHERRISQIQQLNQMPLYPTEKIVW
DENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDIEDVVCRMKP
WQSEYGGIVFGGWARMAQPIVAFSVVEVAKPNIGENWPTRVRADVTINLNVQKHIKEEWE
GLRKHDVCFLITLRPCLPYGTKIDRRQPIVEQTGLMYLRGCEIQGMLDDKGRVIEEGPEP
KPILRGDSRTFRVFLDPNQYQQDMTNTIQTGAEDVYETFNLIMRRKPKENNFKAVLETIR
KLMNTDCVVPDWLHDIILGYGDPGSAHYTKMPNQISTLDFNDTFLSLDHLKSCFPGYKTK
VTVADPSMQKAPFRITFPVYGGKGKKRKEGSEEETEQEETPTLTVEPHVIPNRGPYPYNQ
PKRNTIQFTSTQTEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNLYHNFPEQRTLIVTH
SNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRLELLKEVGR
LQESLGVPGDVSYTCETAGHFFLYQVMSRWEAYLSKVKSKSNHTPDVSDVGKHFPFHSYF
SNAPQPIFKGQTYEEDIELAEGCFRHIKKIFTQLEEFRAFELLRSGLDRSKYLLVKEAKI
IAMTCTHAALKRHDLVELGFKYDNILMEEAAQILEIETFIPLLLQNPEDGFSRLKRWIMI
GDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRLGVPTVDLDAQGRARASLCNLYNWRYKSL
GNLPHVQLLPEFQTANAGLLYDFQLVNVVDFNGVGESEPNPYFYQNLAEAEYAVALFMYM
RLLGYPANRISILTTYNGQKHLIRDIINQRCGNNPMIGQPSKVTTVDRFQGQQNDYIILS
LVRTKAVGHLRDVRRLVVAMSRARLGLYVFARVSLFQNCFELTPVFSQLTARPLKLHILP
GESFPTQRRNVDIPPYSAQVIKNMPEMATFVYNMYMQMMQRSQKYQYRQDLLPPPTSTQQ
TDHLSTQDEGMEVDAETFQYGNEASEQAAQEISKTEEGTTEKMADSIDTEETLKPMEVGS
AQEEKLASAMGNSEQASSEINSEAKAQKSETEATEMNQSDPGQVEVKEPETEQTHSEKQT
QNKPSEGASGTAEGVQQEAMDTGEGGDSHVIDQQEEKGTEHHKMPEHPGRDSDSEYSEDE
GAED
NT seq 4695 nt   +upstreamnt  +downstreamnt
atgggaaagggactccctgcacactcgctgctggccaatacatattgggctccccattca
aagaagaagctgccatttgattacaaggtgattgaagacatctatgtaaaggaaattgca
gcatcgaggttttccatcaaaaagataatgctcttagagttcagtcagtacctggagaac
tacttatgggtaaattactcgccagaggtgtccagtaaaccctatctgatgtccatctgt
tgcatggtgaatgagaaattcagggaaaatgtgccagcctgggagaccttcaagaagaaa
ccagaacacttccctttctttttcaagagtataatggaggcatccataactgtggagact
gaaaatgacttctctttgcatgagctcacagtcctgcttgttttcttagatcactgcttc
aacagcctggaggttgatttgattcgtggacagattcagcaactcatctccctgcccatg
tggatctgccttcagccgagccgtttggaaaaggagctgaagaaaacaccaaaacttagg
aaattctggaatctcattaagaaagcagatgagaaaatggacagtaaagcatgtgcacag
gcaatgcaggaaaggacattccttaaacaacttatccagaatttcctgtcggtactccag
tccatcccaacttctggtacagtcagcatggacagagtgcattactgtgagcgatttata
gaactcatgattgacctggaggctttgcttcccacacgccgctggtttaacactgtgcta
gatgattcacatttggttgttcattgctacctttccaacttattccagcgggaacaggag
ggacatctcttctcccagcttctggacatgctgaaattttatgctgggtttgaaataaat
gaccagacgggaaatgccctaacagagaatgagatgaccacaattcactatgatcgcatt
acttccttgcagagagcagcttttgctcactttcctgaactctacaactttgcactttca
aatgtggcagctgttgacttgcgagaatcccttgtgaaattatttggtcctctaaatcca
aacacactccacggggtggcctcgtacctttgtcttttaccagctctagctgaaggagag
gacacaaaatatgaaaaagagttactcttggaactgctggtctctcggcatgaacgtcgc
atctctcaaattcagcagctgaaccaaatgcccttgtaccccacagagaagattgtatgg
gatgagaacatcgtgcctacagagtactattccggggaagggtgccttgcactgccaaaa
ttaaacctgcagttccttaccctacatgattatctactgcgcaacttcaacctcttccgc
ttggagtcaacatatgagatccgtcaggacattgaggatgtggtttgccgcatgaagcct
tggcagtccgaatatggaggcattgtttttgggggttgggcacgtatggcccagccaatt
gtggccttctcagtagtagaagtggccaagcccaatattggcgagaactggccaactcga
gtcagggccgatgtcacaatcaacctgaatgtccaaaaacacatcaaagaagaatgggaa
ggtctccgcaagcatgatgtctgcttcctgatcaccttaaggccctgcctgccttatggt
acaaaaattgatcggcggcaacccattgtagagcagactggcctcatgtatctacggggg
tgtgagatccaaggcatgctggatgataagggacgagtcattgaggaaggtccagaaccc
aaacccatacttagaggagactccagaacattccgggtgttccttgaccccaaccagtac
cagcaggacatgactaacaccatccagactggggcagaggatgtgtatgaaacatttaac
ttgattatgaggcggaagcccaaagaaaataactttaaggctgttcttgagaccatccgg
aagctgatgaacacagactgtgtggtgcctgactggcttcatgacatcattttgggttat
ggagacccaggaagtgcccactacacaaaaatgccaaatcagatttcaacactggacttc
aatgacacctttttaagtttggaccaccttaagtcatgttttccgggctacaaaactaag
gtgacagtggctgatccatccatgcaaaaggccccttttagaattacgtttcctgtctat
ggaggcaaaggtaagaagcggaaagaaggctccgaagaagaaactgagcaggaagagacc
cccaccttgactgtagagccacatgtcataccgaacagagggccttacccatacaaccaa
ccaaaacgcaacaccatccagttcacatctacccagacggaagctatccgtgcaggcatg
cagcctggccttactatggtagtcggaccacctggcacaggaaaaacagacgtagctgtc
cagatcatttccaatctgtatcacaacttcccggagcagagaacccttattgtgacgcac
tccaatcaggctctgaaccagctgtttgagaagattatggctctggatattgacgagagg
cacctcctgcgtctgggccatggagaggaggagctggagactgagaaggatttcagcagg
tatggaagagtgaattatgtactagcaagaagactggagttacttaaggaggttggaaga
ttacaagagagtttgggggtgccaggagatgtgtcctatacctgcgagaccgctggccat
ttcttcttgtaccaggtcatgtctcgatgggaggcttacctgagcaaggtgaaatccaaa
tccaatcacactccagatgtgagtgatgttggcaaacattttcccttccattcctacttc
tccaatgctcctcagcccatctttaaaggtcaaacgtatgaggaggacatagagctggct
gaaggttgcttccgacacatcaagaagatttttactcagcttgaggagtttcgagccttc
gagttgctgcgtagcgggctagatcgctccaaataccttctggtcaaggaagccaagatc
attgccatgacctgcacacatgctgcactgaaacgccatgaccttgtggagctgggattc
aagtacgataacatcctgatggaagaagccgctcagattcttgaaattgagacgttcatc
cccctcctcctccagaatccggaggatggtttcagccgtctaaagcgctggatcatgata
ggggaccaccatcagctaccccctgtcattaagaacatggccttccaaaagtattccaat
atggagcagtcactctttaccagatttgttcgtctgggtgtgccaacagttgaccttgat
gcccagggaagagcaagagcaagcctgtgcaatttatacaactggcgttataagagcctg
ggaaatctacctcatgtccagcttcttcctgaattccaaacagccaatgccgggctttta
tatgatttccaacttgtcaacgtggtagatttcaatggcgttggagagtcagagcccaac
ccatacttttaccagaatttggctgaagctgaatatgcagtggcactgtttatgtatatg
cgcctacttggatacccagccaatcgtatcagcatcttaaccacctacaatggacagaag
catctgatccgtgacatcatcaatcagcgatgtggaaataaccccatgattggtcagccc
agtaaggttactacagtggatagatttcaaggacagcaaaacgactacatcatcctttca
ctagtcaggaccaaggcagtgggtcacctaagggatgtaagacgactggtagtggccatg
tccagagctcgcttaggcctgtacgtttttgccagagtttccctgttccagaactgtttt
gagctgacccctgtttttagccagctgacagctcgcccactaaagctgcacatcttgcct
ggagagtccttcccaacccagagaaggaacgttgacatacctccctactcagcccaagtc
attaagaatatgcccgaaatggcgacttttgtgtacaatatgtatatgcagatgatgcag
agaagtcagaagtaccagtaccgccaggatcttctccctccccctacttcaacacaacaa
acagatcatctgtccactcaggacgagggtatggaagtagatgcagagactttccaatat
gggaatgaagcatcagaacaagctgctcaggagatctcaaaaacagaagagggcaccaca
gagaagatggctgattccatagacactgaggaaacactaaaacctatggaagtagggagt
gcgcaagaggagaagctggccagtgctatgggcaactctgagcaagcatcatcagagata
aacagtgaagctaaggcccagaagtcagaaactgaagccactgaaatgaaccagtctgat
cctggacaggttgaggtgaaggagccagagactgaacaaacccattcagagaagcaaacg
caaaacaaaccctctgagggggcatccgggactgcggaaggggtgcagcaggaggcaatg
gatacaggagaagggggggattcacatgtgatcgatcagcaagaagaaaagggcacagaa
catcataagatgccagagcatcctggcagagacagtgatagtgaatacagtgaggatgaa
ggggcagaggattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (18)   
   Pfam (18)   
All databases (30)   

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