KEGG   Xenopus tropicalis (tropical clawed frog): 100498574
Entry
100498574         CDS       T01011                                 
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03250  Viral life cycle - HIV-1
xtr04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100498574 (samhd1)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    100498574 (samhd1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtr03400]
    100498574 (samhd1)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     100498574 (samhd1)
SSDB
Motif
Pfam: SAM_2 HD SAM_1 PDEase_I SAM_Ste50p
Other DBs
NCBI-GeneID: 100498574
NCBI-ProteinID: XP_031750194
Xenbase: XB-GENE-976503
UniProt: A0A6I8RDQ5
Position
10:42457415..42483368
AA seq 630 aa
MNGIDRAKRVRRDASPNAQDGYLTPEKRVKRWSGGQSAANYREWDVEEVCLFLGSQGLGE
LEGVFRENKIKGRILEYLTESHLIDLQISSVALRLDLLHCLRMLCQNSSRIMKVFNDPIH
GHIELHPLLVRIIDTPEFQRLRYIKQLGGSYYVFPGASHNRFEHSIGVGYLAGCLVQALH
ERQPELQINHRDMLCVQIAGLCHDLGHGPFSHMFDGRFMPLACPKRKFKHESASVAMFDH
LIKSNGLEEVMKEYGLCLPDDLTFIKEQIAGPLSSEDEQQFNSSQNSSSWPYRGRTEEKS
FLYEIVANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFLKFARVCEVGSKKHICTRDKE
VGNLYDMFHTRNCLHRRAYQHKVGNIIETMITDAFIKADPHIRIKGSDGNYYTISGSVDD
MVAYTKLTDNIYHHILYSDNPDLKEAREILRKVERRQLYKFVGQTHPSINSRIEPDEYDT
LPADLAKSVPQTSTTDVELNTEDFIVDVIHMDYGMKEQNPINNVRFYCKSDPRKAIKIRR
DQVSQLLPEKFAEQIIRVYCKKTDERSLEAAKRYFVQWCMNKDFSKPQDGDVVAPDMTPL
KASWVDMDEDEESPQQSKLLHKSKMKLFTN
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgaacgggatcgacagggccaaacgagtgcgccgcgacgcttcccccaatgcccaggat
ggctacctgaccccggaaaagcgagtgaaacgttggagcggcggccaaagcgctgccaat
taccgggagtgggatgtggaggaggtgtgcttgtttctgggcagccagggactcggggag
ctggagggggtcttcagagaaaacaagataaagggacgaatactggaatatcttacagag
tcccatttaatagatctccagataagttctgttgctttaaggttggaccttctacactgt
ctgcgaatgctgtgccaaaactcctccagaatcatgaaggtgttcaatgacccaatccat
ggccacattgagttgcacccactgctagtccgtatcattgacacccctgagttccagcgc
ctgagatacatcaaacagctcggtggatcctattatgtcttccctggggcttctcacaac
agattcgagcactccattggagtgggatacctggctggatgtcttgttcaggcattgcac
gagagacaaccagagcttcagattaaccacagggacatgctttgtgttcagatagccgga
ctttgtcacgacctgggacatggacccttctcccatatgttcgacgggaggtttatgccc
cttgcctgcccaaaaagaaagtttaagcatgaatctgcctcggtagcaatgtttgaccac
cttataaaatccaatggtttagaggaggtgatgaaagagtacggactctgcttacctgat
gacttaacctttatcaaagagcaaatagcagggcccctgtcatcagaagatgagcagcag
tttaactccagccagaatagctcttcgtggccatatcgaggtcggactgaagagaaaagc
ttcctctacgagattgtggcaaacaaaagaaatggaattgatgtggataagtgggactat
tttgccagggactgtcaccatttgggtattcagaataactttgattacaagcggttttta
aaatttgcccgggtttgtgaagtcggcagcaaaaagcacatctgcacccgagacaaggaa
gtcgggaatttatacgacatgttccatacacgcaattgtctccaccgaagagcataccag
cacaaagtgggaaacatcattgagacaatgatcacagatgcttttataaaggcagaccca
cacatcagaataaaagggtccgatggaaattattatacaatctctggttctgtggatgat
atggtggcatataccaaactcacagataacatataccatcacatcctttattctgataat
cctgatctaaaggaagccagagaaattttgcgcaaagtagaacggcgacagctgtacaaa
tttgtaggacaaacgcaccctagcatcaactccagaattgaaccggatgaatatgataca
ttaccagcggatctggcaaaatcagttccacaaacatcaacaacagatgtagaacttaac
acagaggactttatagtagatgtaattcatatggattatggaatgaaagaacagaatcca
ataaacaacgtgcgcttctactgcaagtcggatcctcgcaaagcaataaagattagaaga
gatcaggtttcccagctcctgccggagaaatttgctgagcagattatccgtgtttattgc
aagaaaacggacgaaagaagcttggaggcggcaaaaagatattttgttcagtggtgcatg
aacaaggatttctctaaaccacaggatggggatgttgtagcgccagatatgaccccattg
aaagccagttgggttgatatggatgaagatgaggaaagcccacaacagagcaagcttctt
cacaaatccaaaatgaagctatttactaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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