KEGG   Xenopus tropicalis (tropical clawed frog): 106557435
Entry
106557435         CDS       T01011                                 
Symbol
aire
Name
(RefSeq) autoimmune regulator
  KO
K10603  autoimmune regulator
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106557435 (aire)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xtr03000]
    106557435 (aire)
   04121 Ubiquitin system [BR:xtr04121]
    106557435 (aire)
Transcription factors [BR:xtr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   SAND domain-containing proteins
    106557435 (aire)
Ubiquitin system [BR:xtr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106557435 (aire)
SSDB
Motif
Pfam: HSR PHD zf-HC5HC2H PHD_2 NADH-G_4Fe-4S_3
Other DBs
NCBI-GeneID: 106557435
NCBI-ProteinID: XP_012826738
Xenbase: XB-GENE-6461262
UniProt: A0A6I8PX51
Position
5:126425535..126448861
AA seq 616 aa
MSERDPSPSSQDLRTLLKWYRTEIAVAVTDLFPLLHGMMDRELITEERFQETQRVGEDSG
AQKASHTLFTWLLSCDLPIIQGFWSLLSTDYILNSYPRLSGIHSLLFAVTGSSHHKARRQ
PHTNKPVSHPKPQAKRKAGADKDTFAVYPLRAGPPAKTKPPRKAEKPMILDCPLIQPPQK
IPSVLPVNQNDKKPVSYTISKPPANTGSSIDRSMQMERELEAVEKNPTHPLKLTLRPKLI
SQQVGSIALSVPAELPQYQSNDDECSVCRDGGELICCDGCPRSFHLSCLVPPLTHIPSGT
WRCDTCNTGRPMSDGQPEMGETTGLSKKPSQESAETQSQKRMKVCEMLADKHDSIIQKSN
SIQNQIYPQIVAQPEICPKPTARTQTCSQQQSSYQAPPQPQACPQSLSSLCMSQTPLRQF
CSQLVPRSHIRTSHQLQTNSQHLSIPQPCSTSGPQIPCTTLTLQSQNCPTPPDNTLSCQT
PSVQTQHSTPCALQKEPCPPASSEPKLCIPLAPLNAINSPTEPQSEISAREPSQGEVPIL
PIPRATESNSGTSLAQEEMVPAPVPLQSEIGELKVPAEVAGSNLTLSRHELECLIAESSF
DCFLQWAFQNISRPVQ
NT seq 1851 nt   +upstreamnt  +downstreamnt
atgtcggagcgagacccttccccatccagccaggatcttcgcactctcctgaaatggtac
cgcactgagatagctgtggctgtgactgacctgttccctctgctgcacggcatgatggac
agagaactcattactgaggagagattccaggaaacacagcgggttggggaggacagtggt
gctcagaaggcttcccatactcttttcacgtggcttttaagctgtgatttgcccatcatc
caaggcttctggtctctcctgtctactgattatatactcaacagctacccacgtctctca
ggaattcacagcttactttttgcagttacaggctcatctcaccacaaggctcggagacaa
ccccataccaacaaacctgtatctcatccgaaaccccaggctaaacgaaaagctggagca
gacaaagacacatttgcagtgtatccattgcgcgctggcccaccagccaaaacaaagcct
ccgcggaaagctgagaaacctatgattttggattgtcctcttatacaacctccacagaaa
atcccaagcgtattgcctgtgaatcagaatgacaagaagcctgtgtcctacaccatcagc
aaaccaccggccaacacaggttctagcatcgacagatccatgcagatggaaagagaacta
gaagctgtagaaaagaacccaactcatcctttgaaactgactctgcgtcctaagcttatc
tctcagcaggttggttccattgccctttctgttcctgctgaattgcctcaataccagagt
aatgacgatgagtgctcagtgtgcagagatgggggggagttaatatgttgcgatggatgc
ccacggtcctttcacctttcctgcttggtgccgcctttgacccatattccaagcggcaca
tggagatgtgatacttgcaatacagggagacctatgtcagatggacaacctgagatgggg
gaaaccactgggttatctaagaagccctcacaggagtctgcagagacccaaagccagaag
agaatgaaagtctgtgagatgctagcagacaagcatgacagcatcatacagaagtccaac
tcaatccagaaccagatttaccctcagatagtagcccagccggagatctgcccaaaacct
acagcccgaacacagacctgctcacaacaacaaagctcttaccaagctccccctcagcct
caggcctgcccccagtcactttcaagcctctgcatgtctcagacacccttaaggcagttt
tgctcgcaacttgtgcccaggtctcatataagaacctcacatcagctgcagaccaactct
caacatttgtctattcctcaaccttgttccacatctggtcctcagataccttgtactact
ctcacccttcagtcccagaactgccctactccaccagacaatacactctcctgccaaaca
cctagtgtccaaactcagcatagcacaccctgtgctttacagaaagagccttgtcctcca
gcatcatcagaacctaaactctgcattccacttgcacctttaaatgccattaactctccc
actgagccccagtctgagatcagtgcaagggaaccttcccagggcgaagtgcccatcttg
ccaatacccagggcaacagaatccaactctggtacctccttagctcaagaagagatggta
cctgcaccagtacctcttcaatctgaaataggagagctcaaggttccagcagaagtcgca
ggaagcaacttgacattaagtcgacatgaactcgaatgccttattgctgagagctccttt
gattgcttcctgcaatgggcatttcagaacatttcccgtcctgtgcagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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