KEGG   Xenopus tropicalis (tropical clawed frog): 394499
Entry
394499            CDS       T01011                                 
Symbol
hmgb2
Name
(RefSeq) high mobility group protein B2
  KO
K11295  high mobility group protein B2
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xtr03036]
    394499 (hmgb2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xtr04147]
    394499 (hmgb2)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    394499 (hmgb2)
Exosome [BR:xtr04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   394499 (hmgb2)
SSDB
Motif
Pfam: HMG_box_2 HMG_box Ets HMG_box_5 Nucleo_P87
Other DBs
NCBI-GeneID: 394499
NCBI-ProteinID: NP_988904
Xenbase: XB-GENE-1000246
UniProt: A0A803KH06
Position
1:48796391..48799130
AA seq 212 aa
MGKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF
EEMAKNDKVRYEREMKTYIPPKGEKKGKKKKDPNAPKRPPSAFFLFCSEHRPQIKSESPG
LSIGDTAKKLGEMWSEQTPKDKLPYEQKAAKLKEKYEKDVAAYKAKGKSDVGKKVPGRPT
GSKKKAEPEEDDDDEDEDEEDEEDDDDEDDDE
NT seq 639 nt   +upstreamnt  +downstreamnt
atgggcaagggagatcctaacaagccaaggggcaagatgtcgtcctatgcgtactttgtg
cagacgtgcagagaagaacacaagaagaaacacccggactcctctgttaacttcgccgag
ttctcaaagaagtgctccgagaggtggaagaccatgtctgcaaaagagaaatcaaagttt
gaagagatggcaaaaaatgataaagtcagatatgaacgtgagatgaaaacctatatacca
cctaaaggagagaagaagggaaagaaaaagaaggatccaaacgcaccaaagaggccacca
tctgcctttttcctattctgttctgaacatcgtccccagataaagagtgagagtcctggt
ctttccattggtgacactgctaagaagctaggagaaatgtggtcagagcagactcctaag
gataagctaccatatgagcaaaaagcagccaagctaaaggagaaatatgagaaagatgtt
gctgcatacaaggcaaaggggaaaagtgatgttggcaagaaagttccaggaaggccgaca
ggttctaaaaagaaggctgaaccagaggaagacgatgatgatgaagatgaggacgaagag
gatgaggaggatgatgatgatgaggatgatgatgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system