KEGG   Xenopus tropicalis (tropical clawed frog): 394808
Entry
394808            CDS       T01011                                 
Symbol
ebf2
Name
(RefSeq) transcription factor coe2
  KO
K09103  early B-cell factor
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xtr03000]
    394808 (ebf2)
Transcription factors [BR:xtr03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   HLH domain only
    394808 (ebf2)
SSDB
Motif
Pfam: COE1_DBD COE1_HLH TIG
Other DBs
NCBI-GeneID: 394808
NCBI-ProteinID: NP_989200
Xenbase: XB-GENE-971136
UniProt: Q6P4K7
Position
3:complement(127859203..127910781)
AA seq 575 aa
MFGVQDTLARSGTALRDKALGVGMDPVRSWVRNVGVVDAKVAAQSGVAVSRAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPIEIERTAFVDFVENEKELSTEKTNNGTHYKLQLLYSNGV
RTEQDLYVRLIDSVTKQPIAYEGQNKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKTAGNPRDMRRFQVVLSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEATPCIKAISPSEGWTTGGAMVIIIGDNFFDGLQVVFGTMLVWSELITPH
AIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFIYTALNEPTIDYGFQRLQKVIPRHPG
DPERLAKEMLLKRAADLVEALYGTPHNNQDIILKRAADIAEALYSVPRNHNQIPALSSSP
VHSGMMGINSYGGQLGVSISESQANNQGYIRNTSSISPRGYSSSSTPQQSNYSTPSNSMN
GYSNVPMSNLGVPGSPGFINGSPTTSPYGIMPSSPPVGSSGSSSILPFSSSVFPSIKQKS
AFAPVIRPQGSPSPACSSSNSNGFRAMTGLVVPPM
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgtttggggtccaggacactttggcaagatcaggaactgccttgagagacaaagcgctg
ggagttggaatggatccagtccggtcctgggttcggaatgttggagtagtggatgccaag
gtggcagctcagagtggggtggcagtgtcccgggctcactttgagaagcagcccccatcc
aacctgcgcaaatcaaacttcttccattttgtgctggctctgtatgaccgacaggggcag
ccaatagagattgagcgcacagcctttgtggactttgtggagaacgagaaggaattaagc
acagagaagaccaataatgggacccactacaaactgcagctcctgtacagcaatggtgtc
cggactgagcaggatctctacgtgaggcttattgactcggtgacaaagcagccaatagct
tatgaaggtcagaacaagaacccggagatgtgcagggtgctgctcacacacgaggtcatg
tgcagtcgctgctgtgaaaagaagagctgcgggaatcggaatgagaccccgtcagatccc
gtcatcattgacaggttcttcctaaagttctttctgaaatgtaaccaaaactgcctgaag
actgcagggaatcccagggatatgagacggttccaggtcgtcctctccaccaccgtgaat
gtagatggacatgtactagccgtgtctgataacatgttcgttcacaacaattccaaacac
gggagaagggcgaggcggctggaccccagcgaagctacgccgtgcattaaagccatcagt
cccagtgaaggctggacaacgggaggggccatggtgataatcattggggacaatttcttc
gatggcctgcaagtggtgtttgggacaatgctggtatggagcgagcttatcaccccccat
gcgatccgggtgcagacacctccgaggcacattcccggtgtggtggaggtgacactgtcc
tacaaatccaaacagttctgcaaaggagccccggggaggtttatttacacagctttaaat
gaaccaacaattgattatggattccagaggcttcaaaaagtaattccaagacatcctggg
gacccagagcggttggcaaaggaaatgttattgaaacgggcagcagatttggtggaggcg
ctctatggaaccccacacaataatcaggacattattctgaagagggcagctgatattgcg
gaggctctgtacagtgttcctcggaatcacaatcaaattcctgcactttccagctcacca
gtgcacagtggcatgatggggattaactcgtatgggggacagcttggcgtcagcatatca
gagtcacaggctaataaccagggttacatccggaacacaagcagtatctctccacgagga
tattccagcagttcaaccccacagcagtctaattacagcacccccagcaacagcatgaat
ggctacagcaacgtccccatgtctaatcttggagtgcctgggtccccgggattcatcaac
ggctcccccaccacctctccctatggcattatgccctccagcccgcctgtgggatcatct
ggaagctcatccattctgcctttttcctcctccgtcttcccgtccattaaacagaagagt
gcctttgcccctgtcatacgaccgcagggttccccatctccagcctgctccagctccaac
tcaaatgggttccgagctatgacaggcttggtggtgccccccatgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system