KEGG   Xenopus tropicalis (tropical clawed frog): 394831
Entry
394831            CDS       T01011                                 
Symbol
tbc1d15
Name
(RefSeq) TBC1 domain family member 15
  KO
K20168  TBC1 domain family member 15
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    394831 (tbc1d15)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    394831 (tbc1d15)
Membrane trafficking [BR:xtr04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    394831 (tbc1d15)
SSDB
Motif
Pfam: RabGAP-TBC PH_RBD
Other DBs
NCBI-GeneID: 394831
NCBI-ProteinID: NP_989223
Xenbase: XB-GENE-1008350
UniProt: Q6P4X9
Position
3:60003528..60050219
AA seq 666 aa
MAAPGQGKVLYDQEGVFIHSSCGKIDEQDTLIPGILRVIEKDEDVVVDWRPLEETMDSSN
ILCAAKDSSSVVEWTTKERGMHLPDHQNSYEAEWDMVNTVSFKKKQFANGGVQSPLNSQS
KWSFLFSLADLKSIKQNKEGMGWSYFVFCLKDDVVLPALHFHQGGSELLLECLGKHVMFC
ESEQDGRILLVSCQNNSLSQSFENLLEESTYSLIQKLKKDPYTATLASFSKVTNYLFDTI
RGSDPVTQRRPREEMAFLGDAIQDLKINQQEESGFEVITRIDVGTRPEVHRRDPMSTAEW
EANIDHEGRICNVDRIKNMIFKGGLCHALRKEVWKFLLGYFPWDSTREERAHLQKRKTDE
YFRMKLQWKSVSEEQENRNSKLRDYRSLIEKDVNRTDRTNKFYEGPDNPGLNLLHDILMT
YCMYDFDLGYVQGMSDLLSPVLYVMENEVDAFWCFVSYMDQMHQNFEEQMQGMKTQLVHL
STLLRLLDSGFCSYLESQDSGYLYFCFRWLLIRFKREFNFQDTLRLWEVIWTDLPCQNFH
LLICCAILESEKQVIMEQHFGFNEILKHINELSMKLDVNDVLSKAEAISLQMMKCKDLPL
NVCDVIGIKNNGVAGPNEATSEENLAKKHKKSSPQYVPVPVIAANGTKSAATLQTLPNSV
HTPTSA
NT seq 2001 nt   +upstreamnt  +downstreamnt
atggcggctcctggccaaggaaaggttctttatgatcaagaaggggtattcatacattca
tcttgtggaaaaattgatgagcaagacactttaatccctggaatattacgtgtcatagaa
aaggatgaggacgttgtagtagattggagaccactagaagaaacaatggattcctctaat
attctttgtgctgcaaaggattcaagctcagttgtagagtggactacaaaggagaggggg
atgcatttaccagatcaccagaacagttatgaagcagagtgggatatggtcaacacagtt
tcttttaagaaaaagcaatttgctaatggaggtgttcaaagtcccctaaatagccagagc
aaatggtcattcctcttcagcttggcagacctgaagtcaattaaacagaacaaagaaggc
atgggctggtcttattttgttttctgcttgaaggatgatgttgtccttccagctcttcat
ttccatcaaggaggaagcgaacttctgcttgagtgcctagggaaacatgtcatgttttgt
gaatctgaacaggatggcagaattcttttggtcagttgtcagaacaatagtctttctcag
tcttttgaaaatcttctggaggagtccacatatagtttaattcaaaaattaaagaaagac
ccatatactgccaccttggctagcttttccaaagttacaaactatttatttgacactata
agaggttctgatcctgttactcaacgcaggccacgcgaggaaatggcgtttttgggtgat
gcaatccaagatctaaaaataaaccagcaggaggaatctggatttgaagtgataactcga
attgatgttggaacacgcccagaagttcatcgaagggatcctatgtcaacagctgaatgg
gaagccaatatagaccatgaaggaagaatttgtaatgtggatcgcattaagaacatgatt
tttaaagggggtctttgtcatgccttaaggaaagaggtttggaaatttcttctgggctac
tttccatgggatagtacacgagaggaacgagctcatttgcaaaaaagaaaaacagatgaa
tattttcgaatgaaacttcagtggaagtcggtcagtgaagaacaagaaaatcgaaattcc
aaactcagagattatagaagcttaatagagaaagatgtcaaccgcacggatcgaacaaac
aagttttacgagggcccagataatccaggattaaatttacttcatgacattttaatgaca
tattgtatgtatgattttgatctcggatatgtgcaaggaatgagtgacttgctttctcct
gttctgtatgttatggaaaatgaagtagatgccttttggtgctttgtatcatacatggat
caaatgcatcagaattttgaggagcagatgcagggaatgaagacgcagctagttcatctg
agtacattgctgcggttactggacagtggtttctgcagttaccttgaatctcaggactct
ggatacttatatttctgtttccggtggcttcttatcagatttaaaagggaatttaatttt
caagatactctacgattgtgggaggtaatatggacagatcttccttgtcagaattttcat
ctgcttatttgctgtgctatcctggaatcagaaaaacaagtaattatggagcaacatttt
ggatttaatgaaattcttaagcacatcaatgaactttccatgaagctggatgttaacgat
gttctaagcaaagctgaagcaatttctttgcagatgatgaagtgcaaggatttaccactg
aatgtttgtgatgttattggcataaagaacaatggtgttgcaggaccaaatgaagcaaca
agtgaagaaaatcttgccaaaaaacataaaaaatcatcacctcaatatgtcccagtgcct
gtaattgctgccaatggaacaaaaagtgctgcaaccctacaaactttgccaaacagtgtt
cacacaccaacttctgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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