KEGG   Xenopus tropicalis (tropical clawed frog): 394962
Entry
394962            CDS       T01011                                 
Symbol
actl6a
Name
(RefSeq) actin-like protein 6A
  KO
K11340  actin-like protein 6A
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    394962 (actl6a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xtr03021]
    394962 (actl6a)
   03036 Chromosome and associated proteins [BR:xtr03036]
    394962 (actl6a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xtr04147]
    394962 (actl6a)
Transcription machinery [BR:xtr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     394962 (actl6a)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     394962 (actl6a)
  Chromatin remodeling factors
   BAF complex
    394962 (actl6a)
   PBAF complex
    394962 (actl6a)
   GBAF(ncBAF) complex
    394962 (actl6a)
   SRCAP complex
    394962 (actl6a)
   INO80 complex
    394962 (actl6a)
Exosome [BR:xtr04147]
 Exosomal proteins
  Exosomal proteins of bladder cancer cells
   394962 (actl6a)
SSDB
Motif
Pfam: Actin MreB_Mbl
Other DBs
NCBI-GeneID: 394962
NCBI-ProteinID: NP_989337
Xenbase: XB-GENE-491948
UniProt: Q6P350
Position
5:complement(108792914..108805168)
AA seq 429 aa
MSGGVYGGDEVGALVFDIGSYSVRAGYAGEDCPKVDFPTTIGVVIDREDGSTPMETDGDQ
NKSRSPTYYIDTNSLRVPRENMEAFSPLKNGMIEDWDSFQAIIDHTYKTHIKSETNLHPV
LMSEAAWNTRVKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGSTHTTAI
PVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMTVDLIPPYMIASKEAVREGATPNWKRK
EKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAE
RLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLLQGF
TDRLTRELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGG
KQCVERKCP
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgagcgggggcgtctatggcggagatgaggttggagctttggtatttgacattggctca
tattctgtgcgtgctggatacgcaggggaggactgtccaaaggtagattttcccacaaca
ataggtgtggttattgacagggaagatggcagcacaccaatggagacagatggagatcaa
aataaatcaagaagcccaacgtattacatcgataccaactcactcagggttccaagagaa
aatatggaggctttttcccctcttaaaaatggaatgattgaagactgggacagttttcaa
gccattatagaccatacatacaagacacacatcaagtctgaaaccaatttacatccagtt
ctgatgtctgaggcagcgtggaatactagagtgaagcgggaaaaattaacggagctgatg
tttgagcactacaatattccagcattcttcctttgcaaaactgctgttcttacagcattt
gcaaatggcagatctacagggcttatcttggatagtggctccacacatactactgccatt
ccagtacatgatggatatgtacttcagcaaggcattgtgaaatcaccccttgcaggggac
tttattactatgcagtgcagagagttatttcaggagatgactgtggatctgattccccca
tatatgattgcttcaaaggaggcagtgcgtgaaggggcaacacccaactggaagagaaaa
gaaaaactacctcaagtcactcgttcttggcataattatatgtgcaactgtgttatccag
gatttccaggcatccgttcttcaagtttcagactctacctatgatgaacaagtggctgct
cagatgccaactgttcattatgaatttcccaatggttacaactgtgattttggagcagag
agattaaaaattccagagggcttatttgatccttccaatgttaaggggctgtctggtaat
accatgcttggtgtgagccatgttgtgactacaagtgttggaatgtgcgatattgatatt
agaccgggtttgtatggcagtgttattgtggcaggtggaaatacattattacagggattt
acagacaggttaacgagagaactttcacagaaaacgccaccaagcatgagattaaaactg
attgcaaataacacaactgtagaaaggcggtttagttcctggattggcggctcaattctt
gcttctttggggacatttcagcagatgtggatttcaaaacaggaatatgaagaaggagga
aagcaatgtgtggagagaaaatgcccatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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