KEGG   Xenopus tropicalis (tropical clawed frog): 394988
Entry
394988            CDS       T01011                                 
Symbol
psmc5
Name
(RefSeq) 26S protease regulatory subunit 8
  KO
K03066  26S proteasome regulatory subunit T6
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03050  Proteasome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    394988 (psmc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:xtr03051]
    394988 (psmc5)
Proteasome [BR:xtr03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     394988 (psmc5)
SSDB
Motif
Pfam: AAA AAA_lid_3 Prot_ATP_ID_OB_C AAA_2 AAA_5 AAA_16 AAA_22 PRS7_OB nSTAND3 RuvB_N TIP49 AAA_18 Mg_chelatase AAA_3 AAA_28 Parvo_NS1 AAA_14 ATPase AAA_17 AAA_33 PhoH FapA IstB_IS21 AAA_24 AAA_25 AAA_7 DUF815 bpMoxR Sigma54_activat RNA_helicase DUF5906 Zeta_toxin AAA_19 AAA_11 TsaE DivIC HR1
Other DBs
NCBI-GeneID: 394988
NCBI-ProteinID: NP_989358
Xenbase: XB-GENE-999928
UniProt: Q6P380
Position
10:15720550..15729918
AA seq 414 aa
MAPPGEYKVAGDGMEQMEMDESRGGIGLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNEL
NAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNC
RVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHP
ELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVR
ELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVI
MATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMP
GASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq 1245 nt   +upstreamnt  +downstreamnt
atggctccgccgggagaatacaaggtggcgggggacgggatggagcagatggagatggac
gagtcccgtggaggtattggcctgaggcagtattacttgtccaagattgaagatctacag
cttgttgttaatgacaagagtcagaatctcaggcgcctgcaagcacagaggaatgaactg
aacgctaaagtgaggctactgagggaggagctgcagctgcttcaagagcagggatcctac
gtaggagaagtggtcagagctatggacaagaagaaagtattggttaaggttcaccccgag
gggaaatttgttgtggatattgataaaaatattgatatcaatgatgtcacaccaaactgt
cgagtcgctctgcgcaatgacagttacacactgcataagatcctgcccaataaggttgat
cccttagtgtccttgatgatggtggagaaagtaccagactccacctatgagatgattggt
ggcttggataaacagatcaaggaaatcaaggaggtcattgaactgcctgtgaaacatccg
gagctctttgaagccttgggtatagcgcagcccaagggtgtgttgctgtacggacctcct
ggtactggaaagactcttttggctcgtgctgttgcccatcacacagactgcacatttata
cgagtctctggatctgaactggtgcagaagttcatcggagaaggtgctcgtatggtgcgt
gagttgttcgttatggcccgagaacacgctccctccattatctttatggatgaaattgat
tcgattgggtcctctcggctcgaggggggctcaggaggagacagtgaggttcagcgcact
atgcttgagctgcttaaccaactggatggatttgaggcaacaaagaacataaaggtaatc
atggcaactaacagaatcgatatattggactctgctctgctgcgcccaggtcgcattgac
aggaagatagagttcccacctcctaatgaagaggcccgtctggacatcctgaaaattcac
tcaagaaaaatgaacttgactcgtgggatcaacctgcgtaaaatagcagaactgatgcct
ggggcatcaggggctgaagtgaagggggtgtgcacagaggcggggatgtatgctcttcgc
gagaggagggtgcacgtcacacaagaagactttgaaatggctgtagcaaaggtgatgcag
aaagacagcgagaagaacatgtccattaagaagctgtggaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (37)   
   Pfam (37)   
All databases (59)   

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