KEGG   Xenopus tropicalis (tropical clawed frog): 394999
Entry
394999            CDS       T01011                                 
Symbol
actr3
Name
(RefSeq) actin-related protein 3
  KO
K18584  actin-related protein 3
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04144  Endocytosis
xtr04530  Tight junction
xtr04810  Regulation of actin cytoskeleton
xtr05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    394999 (actr3)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    394999 (actr3)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    394999 (actr3)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    394999 (actr3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    394999 (actr3)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xtr04812]
    394999 (actr3)
   04147 Exosome [BR:xtr04147]
    394999 (actr3)
Membrane trafficking [BR:xtr04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    394999 (actr3)
Cytoskeleton proteins [BR:xtr04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     394999 (actr3)
Exosome [BR:xtr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   394999 (actr3)
  Exosomal proteins of other body fluids (saliva and urine)
   394999 (actr3)
  Exosomal proteins of bladder cancer cells
   394999 (actr3)
SSDB
Motif
Pfam: Actin MreB_Mbl FtsA Robl_LC7 ALP_N
Other DBs
NCBI-GeneID: 394999
NCBI-ProteinID: NP_989368
Xenbase: XB-GENE-5915063
UniProt: Q6P309
Position
9:complement(91044915..91063519)
AA seq 418 aa
MAARLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRLMKGVDDLDF
HIGDEAIDKPTYATKWPIRHGIVEDWDLMERFMEQIIFKYLRAEPEDHYFLLTEPPLNTP
ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPV
AEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERFSYVCPDLVK
EFSKYDTDGAKWIKQYTGVNAVSKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVV
DEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDVKRTVDARLKLSEELSGGRLKP
KPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggcggctcggctcccggcttgtgtggtggattgtggcaccgggtacaccaagctcggc
tacgcggggaatacagagccgcaattcatcatcccatcatgtatcgctatcaaggagtcg
gccaaggtgggggaccaggcccagcggcgcctaatgaaaggggtggatgatctggatttc
cacattggggatgaagccatagacaagccgacatacgcaactaagtggcccattcgccat
gggattgtggaggattgggacctcatggagagattcatggaacaaatcatcttcaaatat
ctccgagcagaacctgaagatcattacttcctcctgacggaaccccccctgaatacccca
gagaacagggaatacactgctgaaatcatgtttgagtctttcaacgtcccagggctgtac
attgctgttcaggctgttctggccctggctgcatcctggacctctcggcaggttggagag
cgtacgctcactggcacggtgatagacagcggcgatggagtcacacacgtcattcctgtg
gctgaaggttacgtcattggaagctgcattaaacacattcctattgctggtcgggacatt
acctacttcatacagcagttactccgggacagggaagtgggaattccaccggagcaatcg
ctggaaactgccaaggctgtaaaggagcggttcagctacgtgtgcccggatttagttaag
gaatttagcaaatacgatacagacggtgccaaatggatcaaacagtacacgggggtgaat
gccgtttctaagaaggaattcagcattgacgttggttacgagcgctttctggggcccgaa
atcttctttcatccagagtttgccaatccagatttcacccagcccatatcggaagtggtg
gatgaagtgatacagaactgccctattgacgttcggcgccccctgtacaagaatatcgta
ctctctgggggctccactatgttccgcgactttggccggcgcttacagagggatgtaaag
agaacggtcgatgcccggctgaagctgagtgaggagctgagtgggggtcgccttaagccc
aagcccattgacgttcaggtgatcacccaccacatgcagaggtacgctgtttggttcggg
ggatccatgctggcttccacgccggagttttaccaagtgtgccacaccaagaaggactat
gaagagattgggccgagcatatgtcgccacaaccccgtgttcggtgtcatgtcctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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