KEGG   Xenopus tropicalis (tropical clawed frog): 407856
Entry
407856            CDS       T01011                                 
Symbol
stx12
Name
(RefSeq) syntaxin-12
  KO
K13813  syntaxin 12/13
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04145  Phagosome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    407856 (stx12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    407856 (stx12)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xtr04147]
    407856 (stx12)
Membrane trafficking [BR:xtr04131]
 SNARE
  Syntaxin (Qa)
   Stx-Endo
    407856 (stx12)
Exosome [BR:xtr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   407856 (stx12)
SSDB
Motif
Pfam: Syntaxin_2 SNARE Syntaxin
Other DBs
NCBI-GeneID: 407856
NCBI-ProteinID: NP_998883
Xenbase: XB-GENE-974475
UniProt: Q6NX13
Position
2:complement(83628114..83641853)
AA seq 267 aa
MSGYMKQQSRARDFNSIIQTCSGNVQRITNNTAQIRTLLNQLGTSQDSTKLQQNLQQIQH
STNVLAKETNTYLKDLASVPTPLSPAEQRQQKLQKERLMNDFSAALNHFQAIQRQVSTKE
KETVARARAGSRLSADERQKEEQLVSFDNNEDWNQLQSQDEEFAVTEEDLELIKERESAI
QKLEADILDVNQIFKDLAVMIHDQGEMIDSIEANVESAEVHVERGTEQLQRAAYYQKKSR
KKICILVLALAIAAVILGLIIYFSVKS
NT seq 804 nt   +upstreamnt  +downstreamnt
atgtctgggtacatgaagcagcagagccgtgcccgggacttcaacagcattattcagacc
tgcagcggcaatgtgcagaggatcacaaataacactgcccagatccggaccctattaaat
cagctggggacaagccaggattccaccaagctgcagcaaaacttgcagcagattcaacat
tccactaatgtcttggccaaggagaccaacacatatttgaaggaccttgcatctgtcccc
acgccactgtcccctgcagagcagcgccagcagaaacttcaaaaggaacgtcttatgaat
gatttttcagccgcacttaatcacttccaagctatccagagacaagtgtctactaaggaa
aaggaaacagtagcccgggccagggcaggctcccgcctctcggctgatgagaggcagaag
gaggagcagctagtgtcttttgacaacaatgaagactggaatcagctgcaaagccaggat
gaggaatttgcagttacagaggaagatctagagcttataaaggaaagagagagcgccatc
cagaaactagaggcagatattcttgatgtcaaccaaatatttaaagatttagcagtaatg
attcatgaccaaggagaaatgatagatagtatagaagccaatgtggaaagcgcggaagtt
catgtggagagaggaacagagcaactacagagggcagcatattaccagaaaaaatcccgg
aagaagatctgcattttagtattggctcttgctatcgcagctgtgatcctgggtctcatc
atatatttctctgtgaaatcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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