KEGG   Xenopus tropicalis (tropical clawed frog): 407857
Entry
407857            CDS       T01011                                 
Symbol
snrpb
Name
(RefSeq) small nuclear ribonucleoprotein-associated proteins B and B'
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    407857 (snrpb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xtr03019]
    407857 (snrpb)
   03041 Spliceosome [BR:xtr03041]
    407857 (snrpb)
   03032 DNA replication proteins [BR:xtr03032]
    407857 (snrpb)
Messenger RNA biogenesis [BR:xtr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     407857 (snrpb)
Spliceosome [BR:xtr03041]
 Complex A
  U1 snRNP components
   Sm proteins
    407857 (snrpb)
  U2 snRNP components
    407857 (snrpb)
 Complex B
  U1 snRNP components
    407857 (snrpb)
  U4/U6.U5 tri-snRNP components
    407857 (snrpb)
 Complex C
  U2 snRNP components
    407857 (snrpb)
DNA replication proteins [BR:xtr03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     407857 (snrpb)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 407857
NCBI-ProteinID: NP_001001198
Xenbase: XB-GENE-5877283
UniProt: Q6NX14
Position
10:18694504..18700107
AA seq 237 aa
MTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQPE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGAPM
PQAPAGLAGPVRGVGGPSQQVMTPQGRGNVAAAAAAATASIAGAPTPYAAGRGGPPPPMG
RGAPPPGMMGPPPGMRPPMGPPMGMPPGRGGPMGMPPPGMRPPPPGPPPPGMRPTRP
NT seq 714 nt   +upstreamnt  +downstreamnt
atgacggtgggaaaaagcagcaaaatgctgcagcacattgactacagaatgcgctgtatc
ctgcaagatggccggatctttattggaacattcaaggcatttgacaaacacatgaatctc
atcttatgcgactgtgatgagtttagaaagattaagccaaagaactcaaaacagccagaa
cgagaagaaaagagagtacttggtctggtgttgcttcgaggggagaacttggtgtcaatg
actgttgaaggcccacctcccaaagatactggcattgccagggttccattggcaggagct
gcaggaggacctggagtaggaagggcagctggcagaggtgtacctgctggcgcacctatg
ccacaggctcctgctggactggcaggaccagtacgtggtgttggaggaccttctcagcag
gttatgaccccccagggtcgtggtaatgtggcagcagctgctgcagctgctacagcaagc
attgctggagctccaacaccgtatgcagcaggtcgtggcggaccacccccaccaatgggc
agaggagcacctccgccaggcatgatgggaccaccccctggtatgagaccaccaatgggt
ccaccaatgggaatgcctccaggcagaggaggacctatgggaatgccacctccagggatg
agaccacctccacccggacctccaccacctggaatgcgacccactcggccataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

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