KEGG   Xenopus tropicalis (tropical clawed frog): 407890
Entry
407890            CDS       T01011                                 
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
  KO
K12844  U4/U6 small nuclear ribonucleoprotein PRP31
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    407890 (prpf31)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    407890 (prpf31)
Spliceosome [BR:xtr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    407890 (prpf31)
SSDB
Motif
Pfam: Nop Prp31_C DUF2357 Eno-Rase_FAD_bd IMP2_N
Other DBs
NCBI-GeneID: 407890
NCBI-ProteinID: NP_998859
Xenbase: XB-GENE-489336
UniProt: Q6NVP6
Position
7:complement(104947030..104959074)
AA seq 498 aa
MSLADELLADLEEAAEEEEENLIDEDDLETIEEVQEEMQVDLNAESVKSIAKLSDSKLFS
EILLKIDGYIKKQPKASEVMGPVEAAPEYKVIVDANNLTVEIENELNIIHKFIRDKYSKR
FPELESLVPNALDYIRTVKELGNNLDKCKNNENLQQILTNATIMVVSVTASTTQGQQLTD
EELERIEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAAKIMGIAGGLTNL
SKMPACNVMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLHRKAARLVSAKCTL
AARVDSFHESSEGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRK
MKERLGLTEIRKQANRMSFAEIEEDAYQEDLGFSLGHLGKSGSGRIRQAQVNEATKARIS
KTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQKYFS
SMAEFLKVKSEKSGTMTQ
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgtctctggcggatgaattattggctgaccttgaggaggcagcagaagaagaagaggag
aacttgattgacgaagatgatttggagaccattgaagaggtgcaggaggagatgcaagtg
gacttaaatgcagaatcagtaaaaagcattgccaagctatcggatagtaaattgttttca
gaaatccttttaaagattgacggatacatcaaaaagcaaccaaaggcttctgaagtaatg
ggccctgttgaagctgctccagagtacaaagttatcgttgatgctaacaatctgactgtg
gagattgaaaatgagctaaatatcattcacaaatttattcgggacaaatattccaagagg
tttcctgagctggagtccttagttcctaatgctttggattatataaggactgtgaaggag
ctagggaacaatctggataaatgcaaaaacaatgagaatcttcagcaaattctgaccaat
gcaactatcatggttgtaagtgtgacagcctccacaactcaggggcagcaattaacagat
gaagaactggaacgaattgaagaagcgtgtgatatggcgctagaactcaaccaatccaaa
cacagaatttatgagtatgtggaatctcgtatgtcattcattgctcctaacctctccatc
attgtcggggcctccactgctgccaagatcatgggtattgctggaggtcttaccaatctc
tcgaagatgccagcttgtaatgtcatgctgctgggagctcagaggaaaacattatctggt
ttctccagcacctcggtgctgccacatacaggatacatttatcacagcgacattgtccag
tccttgccaccagacttgcacagaaaagcagcacgactggtatctgcaaaatgtaccttg
gcagcacgtgttgatagttttcatgagagttcagaaggaaaggttggatatgacctaaaa
gaagagattgaaagaaaatttgataaatggcaagaacctccaccagtcaaacaagtgaag
ccccttcctgctccactggatggacaaagaaagaaacgtggaggccgcaggtaccgcaaa
atgaaggaacgtttggggttaacagaaatccgtaaacaagccaacagaatgagctttgca
gagattgaagaagatgcatatcaggaagatctaggctttagcttgggtcatcttgggaag
tctggaagtggccgaatacgtcaagctcaagtcaatgaagctactaaagctaggatctcc
aagacattacagcgtactctgcaaaaacaaagtgtggtctatggaggaaaatccactatt
agggatcgatcttcgggtactgcttccagtgttgccttcacgcctcttcaggggttggag
attgttaatcctcaggcggcagaaaagaaagtggctgaagcaaaccagaagtacttttct
agcatggcggaattccttaaagtgaaaagtgagaagtctggcaccatgacacagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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