KEGG   Xenopus tropicalis (tropical clawed frog): 447950
Entry
447950            CDS       T01011                                 
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    447950 (prpf3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    447950 (prpf3)
Spliceosome [BR:xtr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    447950 (prpf3)
SSDB
Motif
Pfam: PRP3 Prp3_C PWI DUF6637
Other DBs
NCBI-GeneID: 447950
NCBI-ProteinID: XP_012825338
Xenbase: XB-GENE-996787
UniProt: F7B9I0
Position
8:complement(127685932..127701369)
AA seq 681 aa
MALSKRELDDLKPWVEKTVKGVLGFSEPTVVTAALNCVGKGMDKKKTVDHLKPFLDDSTY
RFVDKLFDAVKEGRSSRHSRSSSDRSRKRELKEVFGEDPDLSKDSSNSKKKRIPRFSEVE
EEPEVIPGPPSESPGMLTKMQIKQMMEAATRQIEERKKQLSFISPPPAKASSGQSERSAI
GNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNTNMVGLANLHAMGIAPP
KVELKDQSKPTPLILDDQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEKPSE
DLEANTFFDPRVSIASSQRQKRLFKFHEKGKFEKIAQRLRTKSQLEKLQAEIAQAAKKTG
IQTSTRLALIAPKKELREGEIPEIEWWDSFIIPNGTELTEEALLKREDFHGITNLVEHPA
QLSPPVDRDAPVTLGIYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISNLM
RVLGTEAIQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKEKKVKKLKEDISQGIH
VTVYSIRNLSNPSKKFKIEANANQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLSRI
KWDEQTTNTKGNDNDESDEESVTKTNRCTLVWEGTTKERSFGDMKFKQCPTENMAREHFK
KHGAEHYWDLALSKSVLETAD
NT seq 2046 nt   +upstreamnt  +downstreamnt
atggctctttctaagagagaactggatgatttgaagccatgggtggagaaaactgtgaaa
ggagtcttgggcttctctgagcctacagtagtcactgcagctctaaactgtgtggggaag
ggaatggacaagaagaagactgttgatcacctgaaacccttccttgatgactccacttac
cgttttgtggataagctgtttgatgcagtaaaggaaggtcgcagctcgaggcattcaaga
tctagcagtgacagaagcagaaagcgggagctgaaagaggtgtttggagaagatccagac
ctctccaaggattcatccaattccaagaagaagcgaataccacgtttttcagaagtagag
gaagagccggaggtgataccaggccctccctcagaaagcccaggcatgctgaccaagatg
cagataaaacaaatgatggaagcagcgacgcggcagattgaggagaggaaaaaacaactg
agcttcatcagccccccaccagcaaaagcctcatcagggcagtcagagcgttctgccata
gggaacaccatacagccttcccaggcagctaccttcatgaatgatgctattgagaaggcc
aggaaagctgccgagctacaggcccgaatccaggctcagcttgctctaaaaccaggactc
ataggaaatacaaacatggttgggctggctaaccttcacgccatgggaattgctcctcct
aaagtggagttaaaggaccagtcgaagcccacgcctttaattttagacgaccagggccgc
actgttgatgcaactggaaaggagattgagctgacccaccgaatgcccaccctaaaagct
aacatccgggcagtgaaaagggagcagttcaaacagcagctgaaggagaaaccttcagaa
gacttggaggccaatacgttttttgaccccagagtttccattgcctcttcacagcgccag
aaaaggttgtttaaattccacgaaaagggcaagtttgagaagattgcacaacggcttcgg
acaaagtcacaacttgagaaactgcaagctgaaattgcccaagctgcaaagaaaactggt
atccagacatcaactagacttgccctgattgctcccaaaaaggagctgcgagaaggagag
atccctgaaatagagtggtgggactctttcatcatacctaatggcacagaactgacagaa
gaagccttattaaaaagagaagattttcacggtatcacaaatctcgtggagcacccagca
cagctcagccccccagttgacagagatgctccagtgacactaggaatttacctgacgaaa
aaggaacagaaaaagttgcgccgacagactagaagggaagcacagaaagagttacaagaa
aaggtgcgcctgggtcttatgcccccgccagaacccaaggtgaggatatcaaatctcatg
cgagttttggggacagaagcaatccaggatcccacgaaagtagaagcacatgtcagagca
cagatggcaaaaagacagaaggcccacgaagaggcaaatgcagccagaaaactaacagca
gaacagagaaaagagaagaaagtaaaaaaactcaaggaagatatttcccaaggaattcac
gttactgtatatagtatcagaaatctaagtaacccatccaaaaaattcaagattgaagcc
aatgcaaatcagctgtaccttacaggtgtggtggtgttacataaagatgtcaatgtggtg
gtcgtggaaggaggacccaaagcacagaagaaattcaaacgattaatgcttagtagaata
aaatgggatgagcagactacaaacaccaagggaaatgataacgatgaatctgatgaagaa
tccgtaactaagacaaacaggtgcacattagtgtgggagggtacaactaaggaacgcagc
tttggagacatgaaattcaaacagtgtcccacagaaaatatggctagggaacattttaag
aaacatggagcagagcattactgggatctggcgcttagtaagtctgttttggaaactgca
gactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (10)   
   RefSeq(nuc) (2)   
   GenBank (4)   
   EMBL (4)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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