KEGG   Xenopus tropicalis (tropical clawed frog): 447983
Entry
447983            CDS       T01011                                 
Symbol
ssrp1
Name
(RefSeq) FACT complex subunit SSRP1
  KO
K09272  FACT complex subunit SSRP1/POB3
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xtr03000]
    447983 (ssrp1)
   03036 Chromosome and associated proteins [BR:xtr03036]
    447983 (ssrp1)
Transcription factors [BR:xtr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    447983 (ssrp1)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     447983 (ssrp1)
SSDB
Motif
Pfam: PH1_SSRP1-like Rttp106-like_middle SSrecog POB3_N HMG_box HMG_box_2 SSRP1_C
Other DBs
NCBI-GeneID: 447983
NCBI-ProteinID: NP_001184126
Xenbase: XB-GENE-994294
UniProt: A0A6I8RRM8 Q6GLF4
Position
7:complement(56050121..56108744)
AA seq 695 aa
MADTLEFNDIYQEVKGSMNDGRLRLSRAGLMYKNNKTGKVENISAADIAEVVWRRVALGH
GIKLLTNGGHVYKYDGFRDTEYDKLFDYFKSHFRVELVEKDLCVKGWNWGSVRFGGQLLS
FDIGDQPAFELPLSNVSQCTTGKNEVTLEFHQNDDSEVSLMEIRFYVPPTQDDGGDPVEA
FAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDMTLTLNMSEEEVERRFEG
KLKKNMSGCLYEMVSRVMKALVNRKITVPGNFQGHSGSQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEVNCVNFARGTTTTRSFDFEIETKQGSQYTFSSIEREEYGKLFDFVNA
KKLSIKNRGLKEGMKPAYDDYADSDEDQHDAYLERMKEEGKIRENADSDESGDETDESFN
PGEEEDEVAEEFDSNPSASSSSADSDDDAEKKKEAKRAKIVKEKKPRKKKESKKTKDPSA
PKRPMSAYMLWLNASREKIKSENPGISITDLSKKAGEIWKSMSKDKKEEWDRRAEEAKRD
YEKAMKEYNSSTPTEASKKEKKAKGEKKKKAESSEKKKHVKASSPARAALKSNTDSFKSK
EFVSSDESSSDDSIQKKDSEEIASTPDSSAESGSD
NT seq 2088 nt   +upstreamnt  +downstreamnt
atggcggatactttggagttcaatgatatttatcaggaagtgaaaggttctatgaatgat
ggtcgcttgcgcttgtcccgtgctggccttatgtacaagaacaacaagactggaaaggtg
gagaacatttctgctgcagatattgcagaagtagtatggagacgtgttgcccttggacat
ggcataaaactgctcacaaatggaggacatgtgtataaatatgatggctttcgtgataca
gagtatgacaagctgtttgattatttcaaatctcattttcgtgtggaattagtagagaag
gatttgtgtgtgaaaggatggaactggggcagtgtgagatttggaggacagctgctttcg
tttgatataggagatcagccagcctttgaacttccacttagtaatgtttctcagtgtacc
acagggaagaatgaggtgacacttgaatttcatcagaatgatgactctgaggtctctctc
atggagatacgtttctatgtccctcccacacaggacgatggaggggaccctgtagaggca
tttgctcaaaatgttctctctaaagcagatgttatccaggctacaggtgatgcagtttgt
atattccgtgaactccagtgtcttactccacgtggacgttatgatatacgtatatatcct
acctttctccacttgcatggaaaaacgttcgactacaaaattccatacactacagtgttg
cgccttttcttgctgccacacaaggaccaaagacaaatgttctttgtaattagcttggac
ccacctataaagcaggggcagacacgttatcactttctgattctgctcttctcaaaagat
gaggacatgactttgacactcaacatgagcgaggaagaggttgagaggcgttttgaggga
aagcttaaaaagaatatgtcaggctgtctttatgagatggtcagtcgtgttatgaaggct
ttggtaaaccgcaagataactgtcccaggaaattttcagggccactctggatcacagtgc
attacatgttcatacaaggccagttcagggttgctctatccattggaacgtggctttatc
tatgttcataaaccacctgtgcacataagatttgatgaagtcaactgtgtcaactttgcc
cgtggtaccacaactacacgctcatttgacttcgagatagaaacaaaacaaggttcacag
tatactttcagcagcattgaaagggaggaatacggaaagctgtttgattttgtgaacgct
aaaaaactaagtattaaaaatagaggactaaaagagggtatgaaaccagcatatgatgat
tatgcagactctgatgaagatcaacatgatgcttatctagaaagaatgaaagaggagggg
aagattcgtgagaatgcagatagcgatgagtctggtgacgaaactgatgaatcatttaac
ccaggagaggaagaagatgaagttgctgaagagtttgatagtaatccctctgcaagctcc
tctagtgctgacagtgatgatgatgcagagaaaaaaaaagaagctaaaagagctaaaatt
gtgaaagagaagaaaccaagaaaaaaaaaagagtcaaaaaaaaccaaagacccaagtgct
ccaaagcgccccatgtctgcctatatgctgtggttaaatgcgagtcgggagaagattaaa
agtgaaaatccagggatcagcataactgacctatccaagaaagcaggggaaatttggaag
agcatgagcaaagataaaaaagaggagtgggaccgaagagcagaagaagccaagagggat
tatgaaaaagctatgaaagagtacaattcaagtacacctactgaggcatcaaaaaaggaa
aaaaaagcaaaaggagaaaaaaaaaaaaaagcagagtcatcagagaagaaaaagcatgtg
aaagcatcatcaccagccagagcagcactaaaatcgaacactgacagcttcaaaagcaaa
gagtttgtgtccagtgatgaaagttcttctgacgacagcatacagaagaaagattcggag
gaaattgccagcaccccggatagctcagctgaatcgggttcagattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (15)   
   RefSeq(nuc) (1)   
   GenBank (7)   
   EMBL (7)   
Protein domain (7)   
   Pfam (7)   
All databases (34)   

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