KEGG   Xenopus tropicalis (tropical clawed frog): 448169
Entry
448169            CDS       T01011                                 
Symbol
chmp4b
Name
(RefSeq) charged multivesicular body protein 4b
  KO
K12194  charged multivesicular body protein 4A/B
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03250  Viral life cycle - HIV-1
xtr04144  Endocytosis
xtr04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    448169 (chmp4b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    448169 (chmp4b)
  09143 Cell growth and death
   04217 Necroptosis
    448169 (chmp4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    448169 (chmp4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xtr04147]
    448169 (chmp4b)
Membrane trafficking [BR:xtr04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    448169 (chmp4b)
Exosome [BR:xtr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   448169 (chmp4b)
  Exosomal proteins of other body fluids (saliva and urine)
   448169 (chmp4b)
  Exosomal proteins of colorectal cancer cells
   448169 (chmp4b)
SSDB
Motif
Pfam: Snf7 SYF2 Methyltransf_31 DUF2290 DUF6437
Other DBs
NCBI-GeneID: 448169
NCBI-ProteinID: NP_001004866
Xenbase: XB-GENE-941865
UniProt: Q6GL11
Position
10:complement(41637831..41646412)
AA seq 222 aa
MSLIGKLFGTGGKGAKGPSPQEAIQKLRDTEEMLTKKQEFLEKKIEQELVTAKKHGTKNK
RAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKAAHDN
MDIEKVDELMQDIADQQELAQEISDAISKPVGFGEDFDEDELMAELEELEQEELDKNLLE
VQGPETVPLPNVPAAVLPAKPVKKKQEEDDDDMRELENWATA
NT seq 669 nt   +upstreamnt  +downstreamnt
atgtctttgattgggaagctgttcggtaccgggggcaagggagccaaaggccccagcccc
caggaggctatccagaaactgcgggacacggaggagatgctcactaagaaacaggagttc
ctggagaagaagatcgaacaggaactcgtcacggccaagaagcacggcaccaagaacaag
agggctgccctccaagctctgaaacgcaagaagcgatatgagaagcagctggcacagatt
gatggcacgctgtcgaccatcgaattccagagggaagccctggaaaatgccaacacgaat
acagaagttctcaagaacatgggctttgcagctaaggcaatgaaagctgctcacgataac
atggatatcgaaaaagtggatgaactcatgcaagacattgctgaccaacaggaacttgct
caggaaatctcggatgccatttccaagccagttggttttggagaggactttgacgaagat
gagctgatggcggagctggaagagctagaacaggaagaattagacaaaaatctactggaa
gtccagggtccggagactgtgcctctcccaaatgtgcctgcagccgttttgccagcaaaa
ccagtcaagaaaaagcaagaggaggatgacgatgacatgagagaattagaaaactgggcc
accgcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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