KEGG   Xenopus tropicalis (tropical clawed frog): 448264
Entry
448264            CDS       T01011                                 
Symbol
scmh1
Name
(RefSeq) polycomb protein SCMH1
  KO
K11461  polycomb protein SCMH1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    448264 (scmh1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xtr03036]
    448264 (scmh1)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     PRC1.4 specific proteins
      448264 (scmh1)
SSDB
Motif
Pfam: MBT SLED SAM_1 RBR SAM_2 SAM_PNT
Other DBs
NCBI-GeneID: 448264
NCBI-ProteinID: NP_001005790
Xenbase: XB-GENE-968911
UniProt: Q6DJ53
Position
2:complement(78696961..78709539)
AA seq 675 aa
MRKPGHLRATDWKDGRRHGRPSDTHTNQGHFSWEKYLKETGSQPAPPHCFRQSCSPPSND
YKIGMKLEAQDPRNTTSTCIASVVGLTGARLRLRLDGSDNKNDFWRLVDSSEIQPIGTCE
KGGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPAKIFHKEPPSPPQNYFEIGMKLEAVD
RKNPHFICPATIGEVRGSEILVTFDGWRGAFDYWCRYDSRDIFPVGWCSLTGDNLQPPGT
KVAIPKSPLPAAGIATSMMRGPKNLLPVVPGRRRRKPGRKKGQLPKALVHQLSSQPSKLC
EPFRFPKKRGPKPGSKRKPRLLLNQIPTSPTNSTPEPDTSTVPQDAATIPCAAMQAPTVC
IYLNKNGESGPHLDRKKVQHLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHG
GEVISAVFEREQHTLNLPAVNSIGYVLRFLEKLCRNLRSENLFGNQPFTQNPSLQTGSCE
NDRYLAERSNCEGSLHGPGRGSKRYPSETPPYNAPLCPKLPKNDCHASEGETFMLDAGLP
GSMEQHLGTADSPASPNTSRVSREYRSPSYRSVHQPSSISQGTVRRLSSAESERYSSGRP
APRDPSLWNTEDVMQFVRDADPQLGFHAELFRKHEIDGKALLLLRSDVMMKYMGLKLGPA
LKLSHHIDKLKQGKF
NT seq 2028 nt   +upstreamnt  +downstreamnt
atgcgaaaacctggacacctgagagcaaccgactggaaggatggaaggagacatggacga
ccatcagacactcacactaatcagggtcacttcagttgggagaaatacctaaaagaaact
gggtcccagccagcaccccctcactgcttccggcagtcatgttcacctccctccaacgat
tataagataggaatgaagttggaggcccaagatccaagaaacacaacatccacctgcatt
gcctctgtagtgggtctcacaggagccaggcttagactgcgactcgatggcagtgacaac
aagaacgacttctggagactggtggactcttctgagatccaacctattggaacatgtgaa
aagggtgggggcatgttacagcccccactaggcttcagactcaatgcctcctcgtggccc
atgttccttctgaagactctaaatggagctgaaatggcacctgccaaaatattccacaag
gagccaccatcaccaccccagaattattttgaaattgggatgaaattggaggcagtggac
agaaagaatcctcattttatctgccctgctaccataggagaagtgagaggcagtgagatt
cttgtgacatttgacggctggagaggagcatttgattactggtgtcgatatgactcccgg
gatatatttcctgtgggatggtgctcccttactggggataacttgcagcctccagggacc
aaagtggccattcccaagagcccattgccagctgctggaattgccacatccatgatgagg
ggcccaaagaacttgcttccagttgtacctggccgtagacgcagaaagccagggagaaag
aagggacagttgccaaaagctttagtccatcaattgtcaagccaaccctccaaactctgt
gaaccttttcgctttcccaaaaaaagaggtcccaagccaggaagtaagagaaagcctcga
cttttgctaaaccagattcctacatcccccaccaacagcaccccagagccagacaccagc
acagttccacaggatgctgcaaccattccatgtgctgccatgcaggcaccaacagtatgt
atttacctgaacaaaaatggagagtcaggccctcacctagatcgtaagaaggtccaacat
ctacctgatcattttggacctgcacgagcttctgtggtcttgcaacaagcagttcaagct
tgtatagactgtgcgtaccatcaaaagactgtgttcagcttcctgaagcagggccatggt
ggggaagttatatctgctgtgtttgagagagagcaacacacactaaatctgccagcagtg
aacagtatcggttatgtcctccgctttcttgagaagctttgccggaacctgcgcagtgag
aatctgtttggaaaccaaccttttacccagaatccatcactgcaaacagggtcatgtgag
aatgaccgatatctggcagaaaggagtaactgtgagggcagtctccatggtccaggaaga
ggttctaaaagatatcccagtgaaactcccccctataacgcccccttgtgtcccaagtta
ccaaagaatgattgccatgcatcagagggagagacattcatgctggatgctggacttcct
ggatccatggagcagcatctgggtacagcagactctcctgctagccccaacactagccga
gtatctagggagtatcgctctccctcttatcgtagcgtccaccaacctagcagtatttcc
cagggaactgtgcgacggctgagctcagctgagtcagagaggtactcaagtggccggccg
gcaccacgtgacccatccttgtggaacacagaggatgtcatgcagtttgtcagagatgct
gacccacagctcggattccatgctgagcttttccgtaaacatgaaattgatggcaaggcc
ttgctcctcttaagaagtgatgttatgatgaaatacatgggtctgaagctaggtccggcc
ctaaagctctctcaccacatagacaaactcaagcaagggaagttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (30)   

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