KEGG   Xenopus tropicalis (tropical clawed frog): 448449
Entry
448449            CDS       T01011                                 
Symbol
taf7
Name
(RefSeq) transcription initiation factor TFIID subunit 7-like
  KO
K03132  transcription initiation factor TFIID subunit 7
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    448449 (taf7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xtr03021]
    448449 (taf7)
   03036 Chromosome and associated proteins [BR:xtr03036]
    448449 (taf7)
Transcription machinery [BR:xtr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     448449 (taf7)
   Coactivators
    SAGA/TFTC/STAGA complex
     448449 (taf7)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     448449 (taf7)
SSDB
Motif
Pfam: TAFII55_N
Other DBs
NCBI-GeneID: 448449
NCBI-ProteinID: NP_001006764
Xenbase: XB-GENE-5844280
UniProt: A0A803KHG0
Position
8:37693254..37703032
AA seq 349 aa
MTSTKQKTSRSKDDAPHELESQFILRLPQEYASTVRRMVQSGSVNTKDRLSVELHPDGRH
GIVRVDRVPLAAKLVDIPCVVECLKTIDKKTCYKTADICQMLVCTLDGDLYPPLEEPTGT
SDPKASKKKDRDREKKFIWNHGITPPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTD
AEAVSVRWEVIAEDESKEAENLTGLDVSPGMSGIKQGRGSSAVEREELRQIFNDISSSSD
GEEEEGERQEEEDLNIMETEEEQRAGQDGQKGGTNQIVLEMQKQLENLQKKLRETQERRK
RQEELIMKVENVALKTRLQAVLDEFRQQEEREKQQLTSLQEQLETLIEK
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgacttccacaaaacaaaagacatcaaggagcaaagatgatgccccacacgaactagag
agccagtttatcctgcgactcccacaggaatatgcctcaacagttaggaggatggtccag
tctgggagtgtaaatacaaaagacagactttctgttgagttgcatcctgatggacgtcat
ggaattgtacgtgttgaccgtgtaccactggctgcaaaactcgttgatattccctgtgta
gtggagtgtttaaaaactattgacaaaaagacttgctacaagactgccgacatctgtcag
atgttggtatgtacccttgatggagacctctatccacctcttgaagagccaactgggact
agtgacccaaaagccagcaagaagaaggacagggacagagaaaagaaatttatttggaac
catggaattacaccacctctaaagaatgtgcgaaagagacggttcaggaaaactgcaaag
aagaagtatattgagtccccagatgtggagaaggaggtgaaacggcttctgagcacagat
gctgaggcagttagtgtgcgatgggaagtgatagctgaggatgaatcaaaagaagctgag
aatctgactgggttggatgtttccccagggatgtctgggatcaaacagggtcgtggttct
tcagcagtggagagggaagaattgcgtcagatctttaatgacatcagtagtagcagtgat
ggagaagaagaggagggagaacgccaggaagaagaagatcttaatatcatggagactgag
gaggagcagagggcaggacaggatggtcaaaagggaggcactaaccagattgttctggag
atgcagaaacagctggaaaatttacaaaagaaactgcgagagacacaggaaagaagaaaa
agacaagaagagcttataatgaaggttgaaaatgtagcactgaagactcgcttacaagct
gtgttggatgagtttaggcagcaggaggaaagagaaaagcaacagctgacatccctgcag
gagcagctcgagactctaatagagaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (24)   

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