KEGG   Xenopus tropicalis (tropical clawed frog): 448481
Entry
448481            CDS       T01011                                 
Symbol
psmc3
Name
(RefSeq) 26S proteasome regulatory subunit 6A
  KO
K03065  26S proteasome regulatory subunit T5
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03050  Proteasome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    448481 (psmc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:xtr03051]
    448481 (psmc3)
Proteasome [BR:xtr03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     448481 (psmc3)
SSDB
Motif
Pfam: AAA AAA_lid_3 Prot_ATP_ID_OB_C AAA_5 nSTAND3 AAA_16 RuvB_N AAA_22 AAA_2 DUF815 Mg_chelatase AAA_33 PhoH DUF5827 AAA_24 IstB_IS21 TIP49 AAA_7 ATPase AAA_14 AAA_28 Sigma54_activat RNA_helicase Parvo_NS1 AAA_11
Other DBs
NCBI-GeneID: 448481
NCBI-ProteinID: NP_001006786
Xenbase: XB-GENE-1009848
UniProt: Q6DIE6
Position
4:complement(15959189..15974590)
AA seq 423 aa
MASIWDETEADGLGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKEN
SEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPV
IGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQ
ELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQL
VQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ
LDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVS
PDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQ
YYA
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggcgtctatatgggatgaaacggaggcagatgggttgggcgaagaggttctcaaaatg
tccacagaagagattatccagagaactcggctgctggacagtgaaattaaaatcatgaag
agtgaggttttgagagtgacgcatgagctgcaagcaatgagagacaaaattaaagaaaat
agtgagaaaatcaaagtgaataaaaccctcccatacctggtgtccaatgtcatagagctc
ctggatgttgatcctaatgaccaggaagaggatggagccaacattgacttagactctcag
agaaagggaaagtgcgctgttatcaaaacctcaacacgacagacctacttcttgccagtg
attggtttggttgatgctgaaaaactgaagcctggagatcttgtgggagtaaacaaagat
tcttacctcattttggagacccttcctactgagtatgattctcgtgtgaaggccatggaa
gtggacgaaaggcccaccgagcaatacagtgacataggtggtctggataaacagatccag
gagcttgtggaggccattgtactgcccatgaaccacaaggaaaagtttgagaacttggga
atccagccccctaaaggtgtccttatgtacggcccccctggaactggcaagaccctgctg
gctagggcatgcgccgctcagacaaaggctacctttctgaagcttgccggcccacagcta
gttcagatgtttattggagatggtgccaaactcgtacgagatgctttcgctctggccaag
gaaaaagcaccttctatcattttcattgatgaacttgatgctattggcactaaaaggttc
gacagtgagaaagcaggagacagggaggtacagagaacaatgcttgagcttcttaatcag
cttgatggatttcagccaaacacacaagtcaaggtgattgctgctactaatcgtgtggat
atcctggatccggcactgctacgatctgggcgactggacaggaagattgaattccctatg
cccaatgaagaggccagagctcgtatcatgcagatccattcccgtaaaatgaatgtcagc
cccgatgtgaattatgaggagcttgcccgctgtactgatgatttcaatggcgctcagtgc
aaggcagtttgtgttgaagcagggatgatagctctgcgcagaggagccactgaattaaca
catgaagattatatggagggcatcttagaagtccaggccaagaaaaaagccaatttacag
tactatgcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (25)   
   Pfam (25)   
All databases (39)   

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