KEGG   Xenopus tropicalis (tropical clawed frog): 448482
Entry
448482            CDS       T01011                                 
Symbol
hoxc8
Name
(RefSeq) homeobox protein Hox-C8
  KO
K09308  homeobox protein HoxB/C/D8
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xtr03000]
    448482 (hoxc8)
Transcription factors [BR:xtr03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: HOXL
    448482 (hoxc8)
SSDB
Motif
Pfam: Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 448482
NCBI-ProteinID: NP_001006787
Xenbase: XB-GENE-480999
UniProt: Q6DIE5
Position
2:complement(146085631..146089469)
AA seq 242 aa
MSSYFVNPLFSKYKGGESLEPTYYDCRFPQSVSRSHALVYGPSATAPGFQHPSHHVQEFF
HHGSSSLSNSGFQQNPCALTCHGDASKFYGYEALPRQSLYGAQQEASVVQYPDCKSSSNT
NTSEGQGHLNQNSSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRI
EVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARDEEKTEEEGNEEEEKEEEESKES
KE
NT seq 729 nt   +upstreamnt  +downstreamnt
atgagctcctattttgtaaaccctctcttctccaagtacaaaggcggcgagtccttggaa
ccaacttactacgactgtcgcttcccacaaagtgtcagccggagccacgcattggtgtac
ggtccgagtgccacggctccaggcttccagcacccctctcaccatgtgcaggagttcttc
caccatggcagctccagcctctccaattccggattccagcagaacccctgcgccctgacc
tgccacggagacgcctccaaattctatgggtacgaagcgctgcccaggcagtccctttat
ggtgcccagcaagaggcaagcgtggtgcagtaccccgactgtaaatcgtcctccaacact
aacactagcgaaggacaaggccatttaaatcaaaattcgtctcccagcctcatgttccca
tggatgagacctcacgcccccggaaggagaagcggcaggcagacgtacagccggtaccaa
accctggagctggagaaggaatttctcttcaatccttacttgactcggaagcgccggatc
gaggtctcccatgccctgggactgactgagaggcaggtgaagatttggtttcaaaacagg
aggatgaaatggaaaaaagagaataacaaggataagctaccgggggcccgggatgaagag
aaaacagaggaggaaggcaacgaggaagaggagaaagaagaagaggagagcaaggagagc
aaggaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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