KEGG   Xenopus tropicalis (tropical clawed frog): 448748
Entry
448748            CDS       T01011                                 
Symbol
mbd3
Name
(RefSeq) methyl-CpG-binding domain protein 3
  KO
K11591  methyl-CpG-binding domain protein 3
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    448748 (mbd3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xtr03036]
    448748 (mbd3)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    448748 (mbd3)
  Chromatin remodeling factors
   NuRD complex
    448748 (mbd3)
SSDB
Motif
Pfam: MBD_C MBDa MBD
Other DBs
NCBI-GeneID: 448748
NCBI-ProteinID: NP_001006901
Xenbase: XB-GENE-491553
UniProt: Q6DK69
Position
1:98704439..98715542
AA seq 301 aa
MERKRWECSALPQGWKKEEVTRRSGLSAGKSDVYYYSSSPSRYNRSLRDRVGYLNTNPSG
KKFRSKPQLARYLGNSMDLSTFDFRTGKMLMSKINKNRQRMRYDGLNQSKGKPDLNTALP
VRQTASIFKQPVTKVTNHPTNKVKSDPQKAVDQPRQLFWEKKLSGLNAFDIAEELVKTME
LPKGLQGVGPGCTDETLLSAIASALHTSTMPITGQLSAAVEKNPGVWLNTSQPLCKAFMV
TDEDIRKQEELVQQVRKKLEEALMADMLAHVEEISKDGGAPLDKDIDDEDEDPREPEADD
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atggagaggaagcggtgggaatgctcggctctgccccagggctggaaaaaagaagaggtt
acccgaaggtctggcctctccgccggcaagagcgatgtctattactatagcagctctccc
agcagatataatagatcgcttcgagacagggttggataccttaataccaacccaagtggg
aagaaattccgcagtaagcctcagcttgctcgttacttaggaaactccatggatctcagc
acatttgacttccgtacaggaaaaatgctcatgagtaaaatcaacaaaaaccgacagcgg
atgcggtatgatggactaaatcaatctaagggtaagcctgaccttaatactgcacttcct
gtcagacagacagcctccattttcaagcaaccagtgaccaaggtgactaatcaccccacc
aacaaagtcaagagtgacccacagaaagcagttgaccaaccaaggcagctcttctgggaa
aagaaattgagtgggttaaacgcatttgacattgcagaggagttggtgaaaaccatggag
ctacctaaaggtttgcaaggtgtgggtcctggctgcacagatgagactcttctgtctgca
attgctagtgccctgcatacaagcaccatgcctatcacaggtcagctttcagcagcagta
gagaagaatcctggtgtttggcttaatacatctcagcccctttgcaaagcctttatggtg
acagatgaagacatcaggaaacaggaggagctggtgcaacaagtgaggaagaaactggag
gaagctctcatggctgatatgcttgctcatgtggaagaaatttccaaagatgggggtgct
cctttagacaaagatattgatgatgaagacgaagaccccagagaaccagaagcagatgat
gtataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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