KEGG   Xenopus tropicalis (tropical clawed frog): 493219
Entry
493219            CDS       T01011                                 
Symbol
tub
Name
(RefSeq) TUB bipartite transcription factor
  KO
K19600  tubby and related proteins
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:xtr03037]
    493219 (tub)
   04990 Domain-containing proteins not elsewhere classified [BR:xtr04990]
    493219 (tub)
Cilium and associated proteins [BR:xtr03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   493219 (tub)
Domain-containing proteins not elsewhere classified [BR:xtr04990]
 Other domain-containing proteins
  Tubby family proteins
   493219 (tub)
SSDB
Motif
Pfam: Tub Tub_N
Other DBs
NCBI-GeneID: 493219
NCBI-ProteinID: NP_001007493
Xenbase: XB-GENE-962281
UniProt: Q68FB3
Position
4:3531764..3586524
AA seq 454 aa
MTSKHQSDWIPYSVLDDESSSLRQQKLDRQRALLEQKQKKKRQEPLMVQSNVDSRARGRR
MKQSEEQAPLVESYNSSNSSTIYHGIDGPAAFQDEASSPGSQVQILTVGQSGHEEEATET
AASGQQQGKQDLRITMQKKGISSSMNFDEEEDEEDEDSSSSSQLNSSTRPGSATSKKSSK
ETVSAPSPPSNEPSIDVEDLEEFSMRPAPQGVTIKCRITRDKKGMDRGMYPTYYLHLERE
DGKKVFLLAGRKRKKSKTSNYLISIDPTDLSRGGESFIGKLRSNLMGTKFTVYDNGVNPG
KTTSSLEASNLRQELAAICYETNVLGFKGPRKMSVIIPGMNMDHERVSIRPRNEHETLLS
RWQNKNTESVIELHNKTPVWNDDTQSYVLNFHGRVTQASVKNFQIIHDNDPDYIVMQFGR
VAEDVFTMDYNYPMCALQAFAIALSSFDSKLACE
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgacttctaagcaccagtcagactggatcccttacagtgttttagatgatgagagcagc
agtttgcggcaacagaagctcgacaggcagcgggcattattggaacagaaacagaagaag
aagcgccaggagcctctcatggtccaatcaaacgtagacagtcgggcgcgcgggcgcagg
atgaagcagtcggaggaacaagcgcccctagtggaatcctataacagcagcaacagcagc
acaatctaccatggcatcgatggtccggccgcttttcaagatgaagcttcgagccccggg
agccaagtccagattctgacggtggggcagtcgggccatgaagaggaggctacggagacc
gcggccagtggccaacagcagggcaaacaggacctgcggatcaccatgcagaaaaagggg
atatcgagcagcatgaactttgatgaggaggaggatgaagaagatgaagacagttcaagt
tcttctcagctgaacagcagcactcggcccgggtcggccacgagcaagaaatccagtaag
gagacagtgtcggctcccagccccccctccaatgaaccctccatcgatgtagaagacctg
gaggaattctctatgcggccggccccacagggagtgacgatcaaatgcagaatcacgagg
gacaagaaggggatggacagagggatgtaccccacttattacctccatctggaacgggag
gacggcaaaaaggttttcctattggccggcaggaagcgaaagaaaagcaaaacttccaat
tacctcatttccattgacccgacggacctttcccgcgggggggagagctttattggcaaa
ctcagatcaaacctgatgggcacaaagtttaccgtttacgataacggggtgaatccgggc
aaaaccacctcgagtttggaggccagtaacctgcgccaggagctcgccgccatctgctac
gagacaaacgtcttagggttcaaagggccccggaagatgagtgtgattattcccgggatg
aatatggatcatgagcgagtgtctatccggccccggaacgaacacgagacgctgctctct
cggtggcagaacaagaacacggagagcgtcatcgagctgcacaacaagacccccgtgtgg
aacgacgacacccaatcgtacgtgctgaacttccacgggcgggtcacgcaggcgtccgtc
aagaatttccaaatcatacacgacaatgacccggattatatcgtgatgcagttcggccgc
gtggcggaggatgtgtttacaatggactataactaccccatgtgtgcgttacaagcattc
gccatagccctgtccagcttcgatagcaaactggcctgcgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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