KEGG   Xenopus tropicalis (tropical clawed frog): 493468
Entry
493468            CDS       T01011                                 
Symbol
efhc1
Name
(RefSeq) EF-hand domain-containing protein 1
  KO
K23029  EF-hand domain-containing protein 1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:xtr03037]
    493468 (efhc1)
   04812 Cytoskeleton proteins [BR:xtr04812]
    493468 (efhc1)
   04990 Domain-containing proteins not elsewhere classified [BR:xtr04990]
    493468 (efhc1)
Cilium and associated proteins [BR:xtr03037]
 Motile cilia and associated proteins
  Other motile cilia associated proteins
   493468 (efhc1)
Cytoskeleton proteins [BR:xtr04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule-associated proteins (MAPs)
     493468 (efhc1)
Domain-containing proteins not elsewhere classified [BR:xtr04990]
 EF-hand domain-containing proteins
  Other EF-hand domain-containing proteins
   493468 (efhc1)
SSDB
Motif
Pfam: DM10_dom
Other DBs
NCBI-GeneID: 493468
NCBI-ProteinID: NP_001008106
Xenbase: XB-GENE-1011237
UniProt: Q66IK9
Position
5:150468709..150480373
AA seq 544 aa
MASYPVHGLPFLPGNTYRDPTKSAFHRSQTLTYKNGYSRPILPTVGIGREPITANQLSQA
ELDELANKRPTLTYGRAKPAPPSDFIPSYVAFDKKVLRFEGYFQETVPLSPEEHYRVRRV
TLYYYLEDDTISVIEPPMENSGIPQGTFIKRQRHPKNANGDPYHWKDLNVGINVTLYGRT
FRLISCDSFTQEFLESEGIELNPPEGIPTDPFTELRRRPNRTFVTPSDFDKLKQYLTMDR
KVLRFFAVWDDTESMFGEKHPVLIHYYLSDDTVEIREVHERNDGRDPFPVLMKRQHLPKV
VNDTKDTFPMCVLEISDQEVKEWFSPGDFKVGKHISILGRKFFIYDCDAYTRDFYRDKMG
IGDLQPVEVNKEREDEEEKVIQEIPPYNGFGLLEDSLQNCLSLVPKPPKKDVLKMLENDH
NVLRYVVILDSPNPEDKVRRFVLSYFLANDMLSIFERQVRNSGIIGGKFLEKSRVLVPGS
TVDNPIYYGPKDFTIGAAIEVFNHRFIITDADEYVLNYMKAHSKEFPPHVLHSLERHLYP
QPEI
NT seq 1635 nt   +upstreamnt  +downstreamnt
atggcttcttatcccgtgcacggactgcccttcctgcctgggaacacctacagggacccc
acgaaaagcgcatttcaccgctcccagaccttaacctacaaaaacggttacagtcgaccc
attctccccactgtcggcatcggacgggaacccatcacagccaaccagctgtcccaagct
gaactagatgagctggccaacaaaaggccaacactgacctatgggcgtgccaagccggcc
ccaccatcagatttcatcccttcctatgtggcctttgataaaaaggtgctcaggtttgag
ggttacttccaagagactgtccccctgtccccggaggagcactaccgagtgcgcagagtc
acgctgtattactatctggaagatgacactatatcagtgatagagccacctatggaaaat
tccggcatcccccaaggaacatttatcaagcgccaaagacaccccaagaatgcaaacggg
gatccctatcactggaaggatctaaatgtggggatcaacgtcactttgtacggccgaacc
ttccgccttatcagctgtgacagtttcactcaggaattcctggagagcgagggcatcgag
ctgaaccccccagagggcatccctacagacccatttactgaactgaggaggaggcccaat
cgcacattcgtcaccccatccgacttcgataagctcaagcagtacctcactatggaccgt
aaggttctgcgcttctttgctgtgtgggacgacacggagagcatgtttggagagaagcac
ccggtgctcattcactactacctgtctgacgacacagtggaaatcagggaagtgcatgag
cgaaacgatggacgcgacccattcccagtgttgatgaaacgccaacacttacctaaagtg
gtgaatgatacaaaagacaccttcccaatgtgtgtgctggagatctcagaccaagaggtg
aaggaatggttttcccctggagatttcaaagtaggaaagcacattagtattctaggacgc
aagttctttatctatgactgtgatgcctacactcgagacttctacagagataaaatgggg
atcggagaccttcagcctgttgaggttaacaaggagagagaagatgaggaagagaaggtc
atccaggagatccctccatacaatggatttggtttgctcgaagactctttacagaactgc
ctatccctggttcccaagccccccaaaaaggatgtgctgaaaatgctggagaatgaccat
aatgtcctgagatacgtagttattctggattccccaaacccagaagacaaagtgcggcgc
ttcgtcctctcatacttcttggccaacgacatgctgagcatctttgagcgccaagttcgg
aactctggtatcatcggggggaaattcctagagaaatccagggtgctggtaccgggttcc
accgtagacaaccctatctactatggaccgaaggacttcactattggggctgctattgaa
gtcttcaaccacagatttatcatcacagacgccgacgaatacgtattaaactacatgaag
gcgcacagcaaggagttccccccccatgtgttacattccctggaaaggcacctgtacccc
cagccggagatataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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