KEGG   Xenopus tropicalis (tropical clawed frog): 496644
Entry
496644            CDS       T01011                                 
Symbol
clns1a
Name
(RefSeq) methylosome subunit pICln
  KO
K05019  chloride channel, nucleotide-sensitive, 1A
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    496644 (clns1a)
Spliceosome [BR:xtr03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    496644 (clns1a)
SSDB
Motif
Pfam: Voldacs PH_TFIIH
Other DBs
NCBI-GeneID: 496644
NCBI-ProteinID: NP_001032339
Xenbase: XB-GENE-973104
UniProt: Q28H03
Position
2:complement(168842231..168858612)
AA seq 242 aa
MNLLSSFTPPGDGVRRLQPGTEAVVGGKGLGPGTLYIAESRLSWLNGSGLGFSLEYPSIS
LHAISRDTAAYPEEHLYVMVNSKLGEKEDKEAPMVEQEEEEESEDDDDDDEPITEIRFVP
AEKSDLGEMFSAMCDCQALHPDPEDADSDDDFEGDEYDVEAHEQGQGDVPTFYTYEEGLS
HLTTEGQATLERLENMLADSIGNQHTMAGVRTEGSAQEPEDGMDVEAVPAVAGQFEDADV
DH
NT seq 729 nt   +upstreamnt  +downstreamnt
atgaatctcctcagcagcttcacgcctcccggcgacggagtccgacggctgcagcccggc
actgaggcagtggtgggcggcaaggggctcggccctgggaccctctatattgcagagagt
cgcctatcatggctgaatggttccggccttggtttttcattagaatatccttcaatcagt
ctacatgcaatctccagggacacggccgcctatcctgaggagcatctctacgtcatggtg
aactccaagctcggagagaaagaagacaaggaagctcctatggttgagcaggaggaagaa
gaagagagtgaagatgatgatgatgatgatgaacctattacagaaatacgttttgttcct
gcagagaaatcagatttaggagagatgttttcagccatgtgcgattgtcaggccctccat
cctgacccagaagacgcagactctgatgatgactttgaaggagacgagtatgacgttgaa
gctcatgagcagggacagggtgatgttcccacgttttacacgtatgaagaaggcttgtct
cacttaaccacagaaggccaggccacactggagaggttagaaaacatgttggcagactct
attggcaatcagcacaccatggctggagtacggactgaaggatctgcacaggaacctgaa
gatggaatggatgtggaggcagtaccagcagtggccggccagtttgaagatgcagatgtt
gatcactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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