KEGG   Xenopus tropicalis (tropical clawed frog): 496740
Entry
496740            CDS       T01011                                 
Symbol
babam1
Name
(RefSeq) BRISC and BRCA1-A complex member 1
  KO
K20776  BRISC and BRCA1-A complex member 1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    496740 (babam1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xtr04121]
    496740 (babam1)
   03036 Chromosome and associated proteins [BR:xtr03036]
    496740 (babam1)
   03400 DNA repair and recombination proteins [BR:xtr03400]
    496740 (babam1)
Ubiquitin system [BR:xtr04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   BRISC complex
    496740 (babam1)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    BRISC complex
     496740 (babam1)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-A complex
     496740 (babam1)
SSDB
Motif
Pfam: VWA_2
Other DBs
NCBI-GeneID: 496740
NCBI-ProteinID: NP_001011287
Xenbase: XB-GENE-5731069
UniProt: Q5M8J0
Position
1:111742234..111757983
AA seq 318 aa
MDTSEPLEEGDRTHEQRPHTRSNPEGAEDREGLPQAGVGSRSEGEGEAAQVDDPLPTTTA
VPTNCTPPPTLEFQLKTPRVNCPEKVIICLDLSEEMSTQKLESFNGSKANALNSSQKMIE
MFVRTKHKIDKRHEFALVVANNEAMWLSGFTSDPREVCSCLYDLETNVCESFNLEGLFNL
IQQRTEFPVTDNVQTIPPPYVVRIILIYSRPASQPALNLTDNMKKMLQCPYFFFDVIYIH
NGSEEEELRWKDIFSFFSGLDSKGTSYKYEVSITGPALELHNCMARLLAHPLQRPFQSHA
AYSLLEEEEESPESEVTV
NT seq 957 nt   +upstreamnt  +downstreamnt
atggatacttcagagcccctggaggaaggagatcgaacacatgagcagcggcctcacacc
cgttccaatccagaaggggcagaggatagagagggtcttccccaagcaggggtcggtagt
cgaagtgagggagagggtgaggctgcccaggtagatgatccattgcccaccaccaccgct
gttcccacaaattgtaccccacctccaaccctggaattccaactcaagacccccagagta
aactgcccagaaaaagtgattatttgcttggatttatcagaagaaatgtccacacagaag
ctggagtcttttaatggatccaaagcaaatgccctgaattcttcccaaaaaatgattgag
atgtttgtccgaacaaagcacaagattgacaagagacatgagtttgctcttgtggttgca
aacaatgaggctatgtggctgtctggatttacatcagacccccgggaagtttgcagctgc
ctgtatgacctagagactaatgtctgcgagtccttcaatttagaaggccttttcaacctc
atacaacagagaacagaatttccagtgacagataatgtgcagaccattccacctccctat
gtggtgagaattatcctgatctacagccgcccagcctctcaacctgcgcttaaccttaca
gacaatatgaagaaaatgctgcagtgcccttatttcttctttgatgttatctacatccac
aatgggtctgaagaggaggaactacggtggaaggatatttttagtttcttcagcggcctg
gactccaaagggaccagctataaatatgaagtctcaataacgggtccggctctggaactc
cataactgtatggccagactccttgctcacccccttcagagacctttccagagccatgca
gcctacagcctactggaagaagaggaagaaagtccagagagtgaagtgactgtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

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