KEGG   Xenopus tropicalis (tropical clawed frog): 496811
Entry
496811            CDS       T01011                                 
Symbol
mcoln1
Name
(RefSeq) mucolipin-1
  KO
K04992  mucolipin 1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04020  Calcium signaling pathway
xtr04142  Lysosome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    496811 (mcoln1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    496811 (mcoln1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:xtr04040]
    496811 (mcoln1)
Ion channels [BR:xtr04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   496811 (mcoln1)
SSDB
Motif
Pfam: MCLN_ECD PKD_channel Ion_trans
Other DBs
NCBI-GeneID: 496811
NCBI-ProteinID: NP_001011347
Xenbase: XB-GENE-982338
UniProt: Q5M7Q9
Position
3:64369423..64394611
AA seq 565 aa
MDPLRRSRSLSDSPKLSSERRRLLSPSPNYGTRLCEFPSPEEVQLRRRLKYFFMSPCDKF
RAKGRKPYKLGLQLLKIMFVTVQLILFGLSNQMVVQFKEENTEAFKHLFLKDYTDDAEKT
YAVYTQEDVYEHLYYAVEQYFSLSNQTTARYAYTRPFNQSALSVCQQYYRKGHIDPANDT
FNIDPQVITNCLFLDPAEPSQSYKNFTIKFHKLINLTVQFQLKAINIQTIINNEIPDCYT
FTITILFDNKAHSGKVKIQLDNEAKIKECKDPSVYGRGDNHSRLAFDVLVILSCILSFIL
CARSIVRGLLLQHEFAQFVHYRHGLTISLSDRLEFVNGWYLLLIISDVLTVSGTVMKIGI
ESKTFASYDVCSILLGTSTLLVWVGVIRYLSFFQKYNILIVTLRVALPNVIRFCCCVAVI
YLGYCFCGWIVLGPYHVKFRTLSMVSECLFSLINGDDMFVTFSEMQNSSYLVWAFSQLYL
YTFISLFIYMVLSLFIALITGAYETIKCQNSSDFSGSNDNALYQYIAECKDSPSSGKFRS
ANSTSCSMFCCCTQPTHCDEDVAVN
NT seq 1698 nt   +upstreamnt  +downstreamnt
atggatcctctgcgcaggagtcgcagtctgagtgatagccccaagctgtcgtctgagcgc
cggcgcctcctatctccatctcctaactatggtacccgactgtgtgagtttcccagccct
gaggaggtacagctccgccgtcggctcaagtacttcttcatgagtccatgtgataagttt
cgtgccaaggggagaaagccttacaaactgggcctgcagttactaaagatcatgtttgtc
actgtgcagcttatcttgtttgggctcagcaatcagatggttgtacagtttaaggaggag
aatacagaggcctttaaacacctgttcctgaaggattatactgatgatgctgaaaaaacc
tatgctgtatacactcaagaggatgtctatgaacacctttactatgctgtggagcagtac
ttctcactgtccaatcagacgactgcccgatatgcgtatacccgacctttcaaccagtcg
gctctctccgtgtgccagcaatattaccgtaaaggccacattgaccccgctaatgacaca
tttaatattgacccccaggtcatcacaaattgcctgtttttggatcctgcagagccaagc
caaagctacaagaattttactattaagtttcacaagctgatcaatctgactgtacagttc
cagttaaaggctattaatatacaaacaataattaataatgagattccagactgctacacc
tttactatcacgattttatttgataacaaagcacacagtggaaaagtcaagatccagctg
gacaatgaagcaaaaatcaaagaatgcaaagatccaagtgtatatggccgaggtgataat
cactctcgcctggcctttgatgtcttagtcattctttcctgcattctgtcttttatccta
tgcgcccgatccattgtacgtggattacttctacagcatgaatttgctcaatttgtgcac
tatcgtcacggccttaccatttccctgtctgaccgtctggagtttgtgaatggctggtat
ctgctgcttatcatcagtgatgtccttactgtgtcaggaacagtcatgaaaatcggaatt
gagtctaagacctttgctagctatgatgtgtgcagcatcctactggggacatcaactctt
cttgtgtgggttggagttatcagatacctgagctttttccagaaatacaatatcctcata
gtcacactacgtgtcgcccttcctaatgttatccgtttctgttgctgtgtggcggtgatc
tacttgggatattgtttctgtggttggattgtgctgggtccctatcatgttaagttccgc
acactctcaatggtgtccgagtgcctcttctcccttataaatggcgatgacatgtttgtc
accttttctgaaatgcaaaatagcagctacttggtgtgggctttcagtcaactctactta
tatacctttatcagcctttttatatacatggtgctaagtctcttcattgccttaatcact
ggggcctatgaaactattaagtgtcagaattcaagtgattttagtggcagcaatgacaat
gctctttatcaatacatagcagaatgcaaagacagccccagctctgggaaattccgctct
gcaaacagcacaagctgctccatgttttgctgctgtactcaaccgacccattgtgatgaa
gatgtagcagtcaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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