KEGG   Xenopus tropicalis (tropical clawed frog): 496866
Entry
496866            CDS       T01011                                 
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03082  ATP-dependent chromatin remodeling
xtr03083  Polycomb repressive complex
xtr04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    496866 (rbbp4)
   03083 Polycomb repressive complex
    496866 (rbbp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    496866 (rbbp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xtr03036]
    496866 (rbbp4)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     496866 (rbbp4)
  Histone modification proteins
   HAT complexes
    HATB complex
     496866 (rbbp4)
   HDAC complexes
    Sin3A-HDAC complex
     496866 (rbbp4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     496866 (rbbp4)
    PRC2.2
     496866 (rbbp4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     496866 (rbbp4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    496866 (rbbp4)
  Chromatin remodeling factors
   NuRD complex
    496866 (rbbp4)
   NuRF complex
    496866 (rbbp4)
   NuRF complex (fruit fly)
    496866 (rbbp4)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd ANAPC4_WD40 eIF2A MIOS_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 496866
NCBI-ProteinID: NP_001011394
Xenbase: XB-GENE-482002
UniProt: Q28IL0
Position
2:complement(90299793..90314902)
AA seq 425 aa
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKD
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDTEGGVDP
EGQGS
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggctgataaagaggctgcgtttgatgatgcggtggaggaacgagttataaacgaagag
tataagatatggaaaaagaacacccctttcctgtatgatctggtgatgacccatgccttg
gaatggcctagcctgactgcccagtggctcccagatgtcacaagacccgatgggaaagat
ttcagtatccacagactcgtccttgggacacacacttctgatgaacagaatcatctggtg
attgctagtgtgcagcttcctaatgatgatgctcaatttgatgcatcccactatgacagt
gaaaaaggagagtttggaggatttggctctgtcagtgggaaaatagaaattgagatcaaa
ataaatcatgagggagaagtaaacagagctcgttacatgccacagaatccatgcattatt
gctacaaaaactccatccagtgacgttcttgtgtttgattacaccaaacacccatcaaaa
ccagatccttctggtgagtgtaatccagatctccgacttagaggccaccaaaaagagggc
tatggcctatcctggaatcctaatctaagtggcaaccttcttagtgcttcagatgaccat
acaatatgcctttgggatatcagtgctgtacctaaggagggcaaagtggtggatgcaaag
accattttcacagggcacactgcagtggttgaggatgtgtcttggcatttattgcatgaa
tctctctttggatcagttgcagatgatcagaaactgatgatctgggacacccgatcaaac
aacacatcaaagcccagccactctgtggatgctcacacagctgaagtcaactgtctgtca
tttaacccttacagcgagttcatattggcaactgggtcagctgacaagactgttgcatta
tgggacctacgcaatctgaaattaaagttgcattcatttgaatctcacaaagatgaaatt
ttccaggtccagtggtccccacataatgagaccatcctggcatccagtggaactgaccgt
agactaaatgtttgggatttaagtaaaattggagaagagcagtctcctgaagatgcagaa
gatggtccccctgaacttctgtttatccatggtggtcacacagccaagatatcagacttc
tcatggaatcctaatgaaccatgggtgatctgttctgtatctgaggataatatcatgcag
gtctggcaaatggcggagaacatttacaatgatgaagatacagagggtggtgttgatcca
gagggtcaaggttcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system