KEGG   Xenopus tropicalis (tropical clawed frog): 548956
Entry
548956            CDS       T01011                                 
Symbol
agfg1
Name
(RefSeq) arf-GAP domain and FG repeat-containing protein 1
  KO
K15044  Arf-GAP domain and FG repeats-containing protein 1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xtr03019]
    548956 (agfg1)
   04131 Membrane trafficking [BR:xtr04131]
    548956 (agfg1)
Messenger RNA biogenesis [BR:xtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     548956 (agfg1)
Membrane trafficking [BR:xtr04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    548956 (agfg1)
SSDB
Motif
Pfam: ArfGap
Other DBs
NCBI-GeneID: 548956
NCBI-ProteinID: NP_001016202
Xenbase: XB-GENE-5750510
UniProt: Q28CJ7
Position
5:128863108..128920597
AA seq 554 aa
MAASAKRKQEEKHLKMLREMTSLPHNRKCFDCDQRGPTYANMTTGAFVCTSCSGILRGLN
PPHRVKSISMTTFTQQEIEFLQKHGNDVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEK
YEKKRWYVPPEQAKVVASVHASISGSSASSASSTPEVKPLKTLLGEGAPALQLNKGTPSQ
SPVVTRNQVPQAHHEKKQFDLLSDLGTDIFAAPASQPAASANFANFANFNSHTAHNSAHA
DFANFDAFGQSSGVNNFGAFPPSSQTPTPPLNTGTNANANFAQFDNFPKSSSADFGAFNS
TAHSTAPSKTVLSKMSQPAADKYAALADLDNMFSTVQGGGGGQSSSYSSTSVPAPSGPAV
PAPTDNNVFGLGSAVPTAHTHPVASAAGPFAAPASTNPFVSASVAPAVNPFQTNGRAPPG
VRDGHAAEAPFHAFHQTRLATAAGALDVSSFGTASLSMPAGFGTQTPYSLPTSFSGSFHQ
PAFAPQTAFPQQTAFSQQPNGNIQGAGFAVFGQTKPVVTPFGQVAAPGVSSNPFMAGAPS
GQFPTGSSSTNPFL
NT seq 1665 nt   +upstreamnt  +downstreamnt
atggcggccagcgcgaaacgaaagcaggaggagaagcatctcaaaatgcttcgggagatg
accagcctcccgcacaaccgcaaatgtttcgactgtgatcagcgcggcccgacatacgcc
aatatgactacgggggccttcgtgtgcacgtcctgttccggaatcctgcgcggtcttaac
ccaccccacagagtgaagtcaatctctatgactacgtttacacagcaagaaatagaattc
ctacagaagcatggcaatgatgtatgcaaacagatatggctaggattatttgatgacaga
tcttctgcaatcccagattttagagacccacagaaagtaaaagaattcctccaggaaaag
tatgaaaagaagaggtggtacgttcctccagagcaagcgaaggtggtcgcgtctgttcat
gcttctatttcagggtcttctgctagcagtgccagcagtacaccggaggtcaaaccactg
aaaacacttttaggcgagggtgcaccagcactgcagttgaacaaagggacccctagccag
tctccggtcgtcactcgaaatcaggtgccccaggcgcatcacgagaagaaacagtttgac
cttctgagtgaccttggaacagatatctttgctgcccctgcctcccagcccgctgccagc
gccaacttcgccaattttgctaatttcaacagtcacacagctcacaattctgcccatgca
gactttgcaaactttgatgcattcggacaatctagtggtgtgaataattttggagctttc
cccccatcaagtcagacacccaccccgcccttaaacacaggcacaaacgccaatgcaaac
tttgctcagtttgacaattttcccaagtcatcgagtgctgactttggcgccttcaattca
acggcacacagcacggcgccaagcaaaactgtcttgagtaaaatgagccagcctgcagct
gataaatacgcggcactcgctgatctagacaatatgtttagcactgttcaaggtggaggt
ggtggtcaatcaagcagctatagcagcacgtctgttcctgcaccgtctggcccagcggta
ccagcccctacagacaacaatgttttcggattgggttcagcagttcccacagcacacacg
caccctgttgcatcagcagcgggaccctttgcagctcctgcctctacaaatccgtttgtc
tcagcctctgtggcccctgcagttaatccattccagactaatggccgcgcacctccaggg
gtacgagacggccacgcggcagaagccccattccatgctttccaccagacccgactagcg
acagccgcaggagcattggatgtctcttcctttggcacagcatctctaagcatgcccgct
ggctttggaacacagacaccatacagtcttcctacaagctttagtgggagtttccaccaa
cctgccttcgcccctcaaacagccttcccccaacagactgctttctcgcagcagcctaat
gggaatatacaaggtgcagggtttgctgtatttgggcagaccaagcctgttgttactccg
tttggccaggttgcagctcctggagtctctagcaatcctttcatggccggggcaccttcg
gggcagtttccaactggaagttcatccacgaaccctttcttatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system