KEGG   Xenopus tropicalis (tropical clawed frog): 549050
Entry
549050            CDS       T01011                                 
Symbol
rmi1
Name
(RefSeq) recQ-mediated genome instability protein 1
  KO
K10990  RecQ-mediated genome instability protein 1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    549050 (rmi1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtr03400]
    549050 (rmi1)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     549050 (rmi1)
   FA (Fanconi anemia) pathway
     549050 (rmi1)
SSDB
Motif
Pfam: RMI1_C RMI1_N_C RMI1_N_N
Other DBs
NCBI-GeneID: 549050
NCBI-ProteinID: NP_001016296
Xenbase: XB-GENE-952469
UniProt: F7CSK0
Position
1:134250180..134258192
AA seq 509 aa
MATSGIANRVKTWLASTWHVKVPNPWLEACINWIQEENNGSSLLQAEINKQVFEQWLLTD
LRDLEFSVLPANLSDSLKFELNGFYAIQIDSLVDVSQPAYSQHQKLKGKDSTNEQVTCTT
QISQKPWEAKPTRMLMLQLTDGTQHIQGMEYRPIQVLNANLSPGTKMLLQGSIVCRLGVL
LLKPENVKVLGGEVEALVEEYTQAKVLSRLIGVEDNTSVQHSNVQEQTAGVAVGELGQAL
GPSDEDLLASLEENEEFSVNNGVPSESGYYSRSENSSISSFTQLQTQNSRVRQASFPTSD
QTVVSVDVENNHTIEDQYDIDDDLFLEEEIQRELEEMSMSQAVMPRGSTALPTTSGIRSH
ASATSCTSDQNIPPFTYLSTILASKSKDITCIKLKSFIVTLSGNLSHSGGLWNIKAKISD
GTGYLNVEFSDNVLTKLIGFSVPEMKRLKKDPSQQNTLMEGLQRCQMMLTDFCGIMTISY
NPAKEEAVVLSLQDVTEEIMQSLQRLLHS
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggctacatctggcattgctaatcgtgtgaaaacctggcttgcatctacgtggcatgtt
aaagtacccaatccgtggttagaggcttgcattaattggattcaagaagaaaacaatggt
tcatctttactacaagctgaaattaataaacaagtttttgaacaatggcttctaacggat
ttaagggatttagagttttcagttttgccagctaacttatctgattccctaaaatttgaa
ttaaatggcttttatgcgatacagattgattccttagtagatgtaagtcagcctgcctat
tcccagcatcaaaaattaaaaggaaaagacagcacaaatgaacaagttacatgcacaaca
caaataagccaaaagccatgggaggcaaaaccaacacgaatgctcatgttacaactgact
gatggaacacagcatatccagggtatggaataccggccaatccaagttttaaatgctaat
ctctctccaggtaccaagatgctgttacagggctctattgtctgtcggctgggggtactc
cttcttaaacctgaaaatgttaaagttcttggtggagaagtagaagcccttgtagaagag
tatacacaagctaaagttctttcaaggttaattggtgttgaggacaacacttcagttcaa
cattcaaatgttcaagaacagactgcaggtgtagctgttggggaactagggcaagctctt
ggcccatcagatgaggatttgttagcaagccttgaggagaatgaagagttttcagttaat
aatggtgtaccttctgaaagtggctattatagcagaagtgagaattcaagtatatcatca
tttacccaactgcaaacacagaattccagagttagacaagcaagttttcctacgtcagat
caaactgttgtcagtgtagatgttgaaaataatcatacaattgaagatcagtatgatata
gacgatgatttgtttttagaggaagaaattcagcgggaattagaagaaatgtccatgagt
caggctgtgatgccacgtggaagtacagccttgcctaccacttcaggcattagatcacat
gcttcagctaccagttgtacctctgatcaaaacattcctccttttacatatttgtctact
atattggccagcaaaagcaaagatataacttgcataaaactaaaatcatttattgtaacc
ctcagtggaaatctctctcacagtggtggattatggaatataaaggccaaaatatctgat
ggaacaggttatcttaatgtggaatttagtgacaatgttcttacaaaattaataggattt
tcagtgcctgaaatgaaaaggttgaaaaaggaccctagtcagcaaaatacacttatggaa
ggacttcagagatgccaaatgatgctgacagatttttgtggcattatgactatttcttat
aaccctgccaaggaggaagctgttgtactgtctctgcaggatgtcactgaggaaattatg
cagtctttacaaaggctgttgcattcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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