KEGG   Xenopus tropicalis (tropical clawed frog): 549314
Entry
549314            CDS       T01011                                 
Symbol
tmed5
Name
(RefSeq) transmembrane emp24 domain-containing protein 5
  KO
K14825  p24 family protein gamma-2
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xtr03009]
    549314 (tmed5)
   04131 Membrane trafficking [BR:xtr04131]
    549314 (tmed5)
Ribosome biogenesis [BR:xtr03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    549314 (tmed5)
Membrane trafficking [BR:xtr04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   p24 family proteins
    549314 (tmed5)
SSDB
Motif
Pfam: EMP24_GP25L
Other DBs
NCBI-GeneID: 549314
NCBI-ProteinID: NP_001016560
Xenbase: XB-GENE-951292
UniProt: Q28HX3
Position
4:104177407..104192548
AA seq 220 aa
MGKEAVLFLMLTHYTVRHCMGFSQSVDSDYTFTLPAGQKECFFQPMKRDATLEIEYQVLD
GAGLDVDFSLTSPNGELLLSEERQSDGVHSVETIDGDYQFCFDNSFSRMSEKVIFFELIL
DHLNDEGNELEDWKSYITGTDLLDMKLEDILETINSVKGRLTKSAQIQTLLKAFEARDRN
LQESNFERVTFWSVFNLTVMVVVSALQVYMLRSLFEDKEK
NT seq 663 nt   +upstreamnt  +downstreamnt
atggggaaggaagcagtgctgttcctgatgctcactcattacacagtgcggcattgcatg
ggcttctcccagtctgtggatagcgattatacgtttaccctacctgcggggcagaaggag
tgtttctttcagccaatgaagagagatgccactttggagatagagtatcaggtcttggat
ggtgctggtttagatgtggatttctctctaacgtctccaaatggtgaacttctactgtca
gaggaacggcaatcagatggggttcactcggtagaaacaattgacggagattaccagttc
tgctttgacaattcgttcagccgtatgtctgagaaagtgatcttttttgaattgatttta
gaccacttgaatgatgaaggaaacgagctagaggactggaagagttatattacaggcaca
gatctgttggacatgaagctggaggatatcctggaaactattaatagtgtgaaaggacga
ttaaccaaaagtgcccagatccagacgctactaaaagcatttgaagctcgagatcgtaat
cttcaagagagtaattttgaaagagtgactttttggtctgttttcaacttgacagtgatg
gttgtggtgtcagctctccaagtctatatgctaagaagcctttttgaggacaaggaaaag
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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