KEGG   Xenopus tropicalis (tropical clawed frog): 549323
Entry
549323            CDS       T01011                                 
Symbol
rhoc
Name
(RefSeq) rho-related GTP-binding protein RhoC
  KO
K04513  Ras homolog gene family, member A
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04144  Endocytosis
xtr04150  mTOR signaling pathway
xtr04270  Vascular smooth muscle contraction
xtr04310  Wnt signaling pathway
xtr04350  TGF-beta signaling pathway
xtr04510  Focal adhesion
xtr04520  Adherens junction
xtr04530  Tight junction
xtr04621  NOD-like receptor signaling pathway
xtr04625  C-type lectin receptor signaling pathway
xtr04810  Regulation of actin cytoskeleton
xtr05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    549323 (rhoc)
   04350 TGF-beta signaling pathway
    549323 (rhoc)
   04150 mTOR signaling pathway
    549323 (rhoc)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    549323 (rhoc)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    549323 (rhoc)
   04520 Adherens junction
    549323 (rhoc)
   04530 Tight junction
    549323 (rhoc)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    549323 (rhoc)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    549323 (rhoc)
   04625 C-type lectin receptor signaling pathway
    549323 (rhoc)
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    549323 (rhoc)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    549323 (rhoc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    549323 (rhoc)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xtr04147]
    549323 (rhoc)
   04031 GTP-binding proteins [BR:xtr04031]
    549323 (rhoc)
Membrane trafficking [BR:xtr04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    549323 (rhoc)
Exosome [BR:xtr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   549323 (rhoc)
  Exosomal proteins of other body fluids (saliva and urine)
   549323 (rhoc)
  Exosomal proteins of colorectal cancer cells
   549323 (rhoc)
  Exosomal proteins of bladder cancer cells
   549323 (rhoc)
GTP-binding proteins [BR:xtr04031]
 Small (monomeric) G-proteins
  Rho Family
   RhoA/B/C [OT]
    549323 (rhoc)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA SRPRB VASP_tetra
Other DBs
NCBI-GeneID: 549323
NCBI-ProteinID: NP_001016569
Xenbase: XB-GENE-941426
UniProt: Q28HZ4
Position
2:complement(60845247..60881160)
AA seq 193 aa
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDT
AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
LRNDEHTRRELTKMKQEPVKPEDGREMANRINAFGYLECSAKTKDGVREVFEMATRAALQ
VRKHRKKQRCSIL
NT seq 582 nt   +upstreamnt  +downstreamnt
atggcagcaattcggaaaaagctggtgatcgttggagatggtgcatgtgggaagacctgc
ttgctcatcgtattcagcaaggatcaattccctgaagtctatgtaccaacagtctttgag
aactacattgctgatatagaagtagatggaaaacaggtggaattggctctgtgggacaca
gcgggacaggaggattatgacaggctacgccccctttcttaccctgataccgatgttatc
ttgatgtgtttctcaattgacagccctgacagcttagaaaatattcccgagaaatggaca
ccggaagtgaaacatttttgtcccaacgtacccattattcttgttggtaacaaaaaggat
ctaagaaatgatgaacacactagaagagagctgacaaagatgaagcaggagccagtcaaa
ccagaagatggcagagaaatggccaacagaatcaatgcatttggttacctggagtgttct
gccaagacaaaggatggtgtgagagaagtttttgaaatggccacacgggctgccttacaa
gttaggaaacacaggaagaagcaacgttgttccattctataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (12)   
   KEGG PATHWAY (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (38)   

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